Detailed information of evm.model.Ap1.4142 in Astrangia poculata

Genomic Location: Ap1:42386988...42396612
NR annotation: XP_020620026.1, suppressor of SWI4 1 homolog [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9NQ55Suppressor of SWI4 1 homolog OS=Homo sapiens OX=9606 GN=PPAN PE=1 SV=1
Q5REM3Suppressor of SWI4 1 homolog OS=Pongo abelii OX=9601 GN=PPAN PE=2 SV=1
Q91YU8Suppressor of SWI4 1 homolog OS=Mus musculus OX=10090 GN=Ppan PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005362 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04427
all species →		BrixBrix domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045112
all species →		FamilyProtein Peter Pan-likeInterproscan
IPR007109
all species →		DomainBrix domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12661
all species →		PETER PAN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000027
all species →		Biological Processribosomal large subunit assemblyInterproscan
GO:0019843
all species →		Molecular FunctionrRNA bindingInterproscan
GO:0030687
all species →		Cellular Componentpreribosome, large subunit precursorInterproscan
GO:0006364
all species →		Biological ProcessrRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14859SSF1_2; ribosome biogenesis protein SSF1/2-Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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