Detailed information of evm.model.Ap1.4186 in Astrangia poculata

Genomic Location: Ap1:42779439...42782346
NR annotation: KAJ7378042.1, TLC domain-containing protein 2 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A8WGS4TLC domain-containing protein 2 OS=Danio rerio OX=7955 GN=tlcd2 PE=2 SV=1
Q8VC26TLC domain-containing protein 2 OS=Mus musculus OX=10090 GN=Tlcd2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003602 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03798
all species →		TRAM_LAG1_CLN8TLC domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006634
all species →		DomainTRAM/LAG1/CLN8 homology domainInterproscan
IPR050846
all species →		FamilyTLC domain-containingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13439
all species →		CT120 PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0007009
all species →		Biological Processplasma membrane organizationInterproscan
GO:0055088
all species →		Biological Processlipid homeostasisInterproscan
GO:0055091
all species →		Biological Processphospholipid homeostasisInterproscan
GO:0071709
all species →		Biological Processmembrane assemblyInterproscan
GO:0097035
all species →		Biological Processregulation of membrane lipid distributionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.4186.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP