Detailed information of evm.model.Ap1.443 in Astrangia poculata

Genomic Location: Ap1:4069019...4069879
NR annotation: XP_020621313.1, leucine-rich repeat-containing protein 40-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010550 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13855
all species →		LRR_8Leucine rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR003591
all species →		RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR050715
all species →		FamilyLeucine-rich repeat and signaling effector domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45752
all species →		LEUCINE-RICH REPEAT-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0007165
all species →		Biological Processsignal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.443.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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