Detailed information of evm.model.Ap1.444 in Astrangia poculata

Genomic Location: Ap1:4075389...4090763
NR annotation: XP_027054513.1, uncharacterized membrane protein C20F10.07-like isoform X3 [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3KR37Protein Aster-B OS=Homo sapiens OX=9606 GN=GRAMD1B PE=1 SV=1
Q80TI0Protein Aster-B OS=Mus musculus OX=10090 GN=Gramd1b PE=1 SV=2
Q8VEF1Protein Aster-A OS=Mus musculus OX=10090 GN=Gramd1a PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001069 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02893
all species →
GRAMGRAM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011993
all species →
Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR004182
all species →
DomainGRAM domainInterproscan
IPR051482
all species →
FamilyCholesterol transport domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23319
all species →
UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005789
all species →
Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0032366
all species →
Biological Processintracellular sterol transportInterproscan
GO:0032934
all species →
Molecular Functionsterol bindingInterproscan
GO:0120015
all species →
Molecular Functionsterol transfer activityInterproscan
GO:0140268
all species →
Cellular Componentendoplasmic reticulum-plasma membrane contact siteInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.444.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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