Gene detail

Detailed information of evm.model.Ap1.485 in Astrangia poculata

Genomic Location: Ap1:4453913...4458211
NR annotation: XP_020631944.1, apoptosis regulator R1-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q91827	Apoptosis regulator R1 (Fragment) OS=Xenopus laevis OX=8355 PE=2 SV=1
Q00709	Apoptosis regulator Bcl-2 OS=Gallus gallus OX=9031 GN=BCL2 PE=2 SV=1
Q07817	Bcl-2-like protein 1 OS=Homo sapiens OX=9606 GN=BCL2L1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000670 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00452 all species →	Bcl-2	Apoptosis regulator proteins, Bcl-2 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026298 all species →	Family	Bcl-2 family	Interproscan
IPR046371 all species →	Domain	Bcl-2, Bcl-2 homology region 1-3	Interproscan
IPR036834 all species →	Homologous_superfamily	Bcl-2-like superfamily	Interproscan
IPR002475 all species →	Family	Bcl2-like	Interproscan
IPR020717 all species →	Conserved_site	Apoptosis regulator, Bcl-2, BH1 motif, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11256 all species →	BCL-2 RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0042981 all species →	Biological Process	regulation of apoptotic process	Interproscan
GO:0005741 all species →	Cellular Component	mitochondrial outer membrane	Interproscan
GO:0008630 all species →	Biological Process	intrinsic apoptotic signaling pathway in response to DNA damage	Interproscan
GO:0042803 all species →	Molecular Function	protein homodimerization activity	Interproscan
GO:0046982 all species →	Molecular Function	protein heterodimerization activity	Interproscan
GO:0097192 all species →	Biological Process	extrinsic apoptotic signaling pathway in absence of ligand	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04570	BCL2L1, bcl-xL; Bcl-2-like 1 (apoptosis regulator Bcl-X)	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.