Gene detail

Detailed information of evm.model.Ap1.692 in Astrangia poculata

Genomic Location: Ap1:6727089...6729843
NR annotation: XP_020610736.1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q0MQA3	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Pongo pygmaeus OX=9600 GN=NDUFA6 PE=2 SV=3
Q9CQZ5	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Mus musculus OX=10090 GN=Ndufa6 PE=1 SV=1
Q0MQA4	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Gorilla gorilla gorilla OX=9595 GN=NDUFA6 PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008953 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05347 all species →	Complex1_LYR	Complex 1 protein (LYR family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016488 all species →	Family	NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6	Interproscan
IPR045299 all species →	Domain	NDUFA6, LYR domain	Interproscan
IPR008011 all species →	Domain	Complex 1 LYR protein domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12964 all species →	NADH-UBIQUINONE OXIDOREDUCTASE B14 SUBUNIT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005747 all species →	Cellular Component	obsolete mitochondrial respiratory chain complex I	Interproscan
GO:0006979 all species →	Biological Process	response to oxidative stress	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03950	NDUFA6; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6	-	Non-alcoholic fatty liver disease	ko04932	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.