Detailed information of evm.model.Ap1.86 in Astrangia poculata

Genomic Location: Ap1:729227...731704
NR annotation: KAJ7339635.1, maintenance of ER location [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010526 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15328
all species →		GCOM2Putative GRINL1B complex locus protein 2FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026213
all species →		FamilyDNA-directed RNA polymerase II subunit GRINL1Interproscan
IPR051375
all species →		FamilyTuftelin/GRINL1A/MYZAP/CCD68Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23171
all species →		GDOWN1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003711
all species →		Molecular Functiontranscription elongation factor activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006368
all species →		Biological Processtranscription elongation by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K21987POLR2M, GRINL1A; DNA-directed RNA polymerase II subunit GRINL1A-Transcription machineryko03021deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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