Gene detail

Detailed information of evm.model.Ap10.1485 in Astrangia poculata

Genomic Location: Ap10:14835595...14844662
NR annotation: XP_020622928.1, LOW QUALITY PROTEIN: N-fatty-acyl-amino acid synthase/hydrolase PM20D1.2-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q08BB2	N-fatty-acyl-amino acid synthase/hydrolase PM20D1.2 OS=Danio rerio OX=7955 GN=pm20d1.2 PE=2 SV=1
Q8C165	N-fatty-acyl-amino acid synthase/hydrolase PM20D1 OS=Mus musculus OX=10090 GN=Pm20d1 PE=1 SV=1
Q08BT9	N-fatty-acyl-amino acid synthase/hydrolase PM20D1 OS=Xenopus tropicalis OX=8364 GN=pm20d1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009108 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07687 all species →	M20_dimer	Peptidase dimerisation domain	Domain	Interproscan
PF01546 all species →	Peptidase_M20	Peptidase family M20/M25/M40	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011650 all species →	Domain	Peptidase M20, dimerisation domain	Interproscan
IPR036264 all species →	Homologous_superfamily	Bacterial exopeptidase dimerisation domain	Interproscan
IPR002933 all species →	Family	Peptidase M20	Interproscan
IPR047177 all species →	Family	Peptidase M20A	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45962 all species →	N-FATTY-ACYL-AMINO ACID SYNTHASE/HYDROLASE PM20D1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan
GO:0006520 all species →	Biological Process	amino acid metabolic process	Interproscan
GO:0006807 all species →	Biological Process	obsolete nitrogen compound metabolic process	Interproscan
GO:0016811 all species →	Molecular Function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	Interproscan
GO:0043604 all species →	Biological Process	amide biosynthetic process	Interproscan
GO:0043605 all species →	Biological Process	amide catabolic process	Interproscan
GO:0044255 all species →	Biological Process	obsolete cellular lipid metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13049	PM20D1; carboxypeptidase PM20D1	EC:3.4.17.-	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.