Detailed information of evm.model.Ap10.1670 in Astrangia poculata

Genomic Location: Ap10:16616620...16641590
NR annotation: KAJ7370748.1, hypothetical protein OS493_030177 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
M9NDE3Protein bark beetle OS=Drosophila melanogaster OX=7227 GN=bark PE=1 SV=1
Q5RDA4Galectin-3-binding protein OS=Pongo abelii OX=9601 GN=LGALS3BP PE=1 SV=1
Q08380Galectin-3-binding protein OS=Homo sapiens OX=9606 GN=LGALS3BP PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000535 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00530
all species →
SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF13229
all species →
Beta_helixRight handed beta helix regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012334
all species →
Homologous_superfamilyPectin lyase foldInterproscan
IPR001190
all species →
DomainSRCR domainInterproscan
IPR011050
all species →
Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR036772
all species →
Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR000998
all species →
DomainMAM domainInterproscan
IPR000742
all species →
DomainEGF-like domainInterproscan
IPR017448
all species →
DomainSRCR-like domainInterproscan
IPR039448
all species →
DomainRight handed beta helix domainInterproscan
IPR053243
all species →
FamilySeptate junction maturation regulatorInterproscan
IPR006626
all species →
RepeatParallel beta-helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47653
all species →
PROTEIN BARK BEETLEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →
Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap10.1670.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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