Genomic Location: Ap10:17190352...17200401
NR annotation: XP_020603798.1, low-density lipoprotein receptor-related protein 6-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap10.1711 |
| Transcript |
| evm.model.Ap10.1711 |
| Protein |
| evm.model.Ap10.1711 |
| UniProt accession | Description |
|---|---|
| P98164 | Low-density lipoprotein receptor-related protein 2 OS=Homo sapiens OX=9606 GN=LRP2 PE=1 SV=3 |
| C0HL13 | Low-density lipoprotein receptor-related protein 2 OS=Sus scrofa OX=9823 GN=LRP2 PE=1 SV=1 |
| P98106 | P-selectin OS=Rattus norvegicus OX=10116 GN=Selp PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000594 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00084 all species → | Sushi | Sushi repeat (SCR repeat) | Domain | Interproscan |
| PF00058 all species → | Ldl_recept_b | Low-density lipoprotein receptor repeat class B | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000436 all species → | Domain | Sushi/SCR/CCP domain | Interproscan |
| IPR011042 all species → | Homologous_superfamily | Six-bladed beta-propeller, TolB-like | Interproscan |
| IPR050778 all species → | Family | Cueball/EGF/LRP/Nidogen | Interproscan |
| IPR000033 all species → | Repeat | LDLR class B repeat | Interproscan |
| IPR035976 all species → | Homologous_superfamily | Sushi/SCR/CCP superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46513 all species → | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | Interproscan |
evm.model.Ap10.1711. This gene does have a gene model — the search simply returned no hit.evm.model.Ap10.1711.
