Detailed information of evm.model.Ap10.1751 in Astrangia poculata

Genomic Location: Ap10:17673737...17675732
NR annotation: XP_020603825.1, ectonucleoside triphosphate diphosphohydrolase 1-like isoform X1 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9XI62Probable apyrase 3 OS=Arabidopsis thaliana OX=3702 GN=APY3 PE=2 SV=1
Q617Y0Nucleoside-diphosphatase mig-23 OS=Caenorhabditis briggsae OX=6238 GN=mig-23 PE=3 SV=1
Q8TGH6Guanosine-diphosphatase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=GDA1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001770 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01150
all species →		GDA1_CD39GDA1/CD39 (nucleoside phosphatase) familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000407
all species →		FamilyNucleoside phosphatase GDA1/CD39Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11782
all species →		ADENOSINE/GUANOSINE DIPHOSPHATASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016787
all species →		Molecular Functionhydrolase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap10.1751.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of evm.model.Ap10.1751 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

49Samples
0TPM > 0
4Conditions
0.0Max TPM
0.0Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
whole organism · cold control 14 0 0.00 0.00
whole organism · heat control 12 0 0.00 0.00
whole organism · cold challenge 12 0 0.00 0.00
whole organism · heat challenge 11 0 0.00 0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (APOCU_TPM, StringTie quantification over 49 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

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