Genomic Location: Ap10:1951729...1962874
NR annotation: CAH3112885.1, unnamed protein product [Pocillopora meandrina]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap10.201 |
| Transcript |
| evm.model.Ap10.201 |
| Protein |
| evm.model.Ap10.201 |
| UniProt accession | Description |
|---|---|
| P04069 | Carboxypeptidase B OS=Astacus astacus OX=6715 PE=1 SV=1 |
| Q6P8K8 | Carboxypeptidase A4 OS=Mus musculus OX=10090 GN=Cpa4 PE=2 SV=2 |
| O02350 | Zinc carboxypeptidase A 1 OS=Anopheles gambiae OX=7165 GN=AGAP009593 PE=2 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000439 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00246 all species → | Peptidase_M14 | Zinc carboxypeptidase | Domain | Interproscan |
| PF02244 all species → | Propep_M14 | Carboxypeptidase activation peptide | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000834 all species → | Domain | Peptidase M14, carboxypeptidase A | Interproscan |
| IPR036990 all species → | Homologous_superfamily | Metallocarboxypeptidase-like, propeptide | Interproscan |
| IPR003146 all species → | Domain | Carboxypeptidase, activation peptide | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11705 all species → | PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004181 all species → | Molecular Function | metallocarboxypeptidase activity | Interproscan |
| GO:0006508 all species → | Biological Process | proteolysis | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| GO:0005615 all species → | Cellular Component | extracellular space | Interproscan |
evm.model.Ap10.201.Transcript abundance of evm.model.Ap10.201 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
