Gene detail

Detailed information of evm.model.Ap10.254 in Astrangia poculata

Genomic Location: Ap10:2525282...2528457
NR annotation: KAJ7377574.1, Ragulator complex protein lamtor5 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7RT29	Ragulator complex protein LAMTOR5 homolog OS=Nematostella vectensis OX=45351 GN=v1g226489 PE=3 SV=1
Q3SZ68	Ragulator complex protein LAMTOR5 OS=Bos taurus OX=9913 GN=LAMTOR5 PE=3 SV=1
O43504	Ragulator complex protein LAMTOR5 OS=Homo sapiens OX=9606 GN=LAMTOR5 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009423 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16672 all species →	LAMTOR5	Ragulator complex protein LAMTOR5	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024135 all species →	Family	Ragulator complex protein LAMTOR5	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13342 all species →	RAGULATOR COMPLEX PROTEIN LAMTOR5	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005764 all species →	Cellular Component	lysosome	Interproscan
GO:0043066 all species →	Biological Process	negative regulation of apoptotic process	Interproscan
GO:0043154 all species →	Biological Process	obsolete negative regulation of cysteine-type endopeptidase activity involved in apoptotic process	Interproscan
GO:0071230 all species →	Biological Process	cellular response to amino acid stimulus	Interproscan
GO:0071986 all species →	Cellular Component	Ragulator complex	Interproscan
GO:1904263 all species →	Biological Process	positive regulation of TORC1 signaling	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16344	LAMTOR5, HBXIP; ragulator complex protein LAMTOR5	-	mTOR signaling pathway	ko04150	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.