Detailed information of evm.model.Ap10.330 in Astrangia poculata

Genomic Location: Ap10:3434079...3440623
NR annotation: XP_020624215.1, synaptophysin-like protein 1 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q16563Synaptophysin-like protein 1 OS=Homo sapiens OX=9606 GN=SYPL1 PE=1 SV=1
O09117Synaptophysin-like protein 1 OS=Mus musculus OX=10090 GN=Sypl1 PE=1 SV=2
Q5VXT5Synaptophysin-like protein 2 OS=Homo sapiens OX=9606 GN=SYPL2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007373 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01284
all species →		MARVELMembrane-associating domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008253
all species →		DomainMarvel domainInterproscan
IPR001285
all species →		FamilySynaptophysin/synaptoporinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10306
all species →		SYNAPTOPHYSINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0008021
all species →		Cellular Componentsynaptic vesicleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap10.330.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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