Gene detail

Detailed information of evm.model.Ap10.333 in Astrangia poculata

Genomic Location: Ap10:3500799...3511631
NR annotation: XP_020624213.1, uncharacterized protein LOC110061705 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap10.333

atggcacacagaggttgcctattaactctttactgcaatcactgcagtacagtcttagccacaccggatatgttaatgctggctactgttccaccaacacagacacatgtgaccattaaaaaggacaaagaagaacaagcatacgccgagaaaatccggaaaattcccaacccggaccccaagagagctgcgttttgtccttttaaagttctttgcaagaactgcaatgaatacgtcggaactatcagcattgttgaagagaatacacttatttgcttcaagattgaaaacgttcatttcaaacgggaatatgaagaaatccgagggaagaagctaaagcagatcaaagacaagctcttgcagtatggcctggaagttgtgaatgtttctcaattaagagagacagtttctcaagctgttaaacaaaattacatcccttcagagcctctcgtatattgcgatatcaatataaccacggaggaaatcctgtcttttaccaaacagatcccccgcgaatatcaaagagagctctttctgcacgccttacgcggaaacacgctggtctacctgcccacgggctcgggtaagaccttgatcgcggcaatggttcttagctgtatgaagaaattgaacccaaagaaactgatggtgtttcttgtcgaccgcataccacttgtctatcaacagagtgactacatcaagtcccaggtcccggatctaagagtcgagattttggcgggagatattgggcgttttccaggagacaaagctcgttggatagctactgtacaggcgctaagtgaaaataaaattgatttgctagttttgacgcatcagattctgctcaacttaatgggtgatgatcagccagtggtgcgtatgtcggatatctctgttctcgtgtttgatgaagcccaccactgccttggaaaccatccctataatcaaatcatgagggatttctacaaaggtacaagcaacagattcaagcctctggtgctagcgctgaccgcatctcctgcaggcctagatacaccacagtctacgtcaaatagattggaagagctgctttccaatctctgcgcgtgtgcgcgcatgcctttacggtcaaccgatttggaggtgtattggaaccgaccggaaactgcgtacgagctggtttccatgaacacgaagcaaaagctattgcaatcatttgttgagtcttatctcacttccttgacaatgcagatcgaaacggaagcgaaattcccacgtgcgctggacaagctaaacgtgctgaaacctaactaccgtggtgctttgcgcaagttgattgaacgttgttatggcgacaagaaccgagtgaaaggcctggcactaggtgagcacgccatgcacatgctcagtgtgattgaggtgaataacattctgggcaacgagtatgcggttgattgtctcgaagagtgcctcaggcaactgcgatcggctacctctcctatggaacagctcaagaagaagctcatcggttcttcggcacagctgatggttctagaatcttcgatcgcaagcctgaggcgagtttcaaagtttttcgcgtccagtgacaggtatcagcaccttaccaaagagcttcggaatttcatccatcaagttgaaagggatgaaacttccaggggaatcattttcgtcaagatgaggaagactgcgtacaaactctgcgaacggctgagacaggaaactggaatcgctgaaaagctgaacccagccttcctcgtcggccacggacagggaagcgatggaatggactggagaggagaacaggaagaaatccttaagaagtttagatcaggcgaggcaaaactgcttgttagcacgagtgtattggaggagggactggacgttccggtttgtaacctggttatccggtttgatagcgcgctgacattgcgggcactggtgcagagccgcgggcgtgcatcccgccgtcccgacagccgtttcgtggtgatctgcagcgactccgacgagcaagggaacgctcttggtgcgatcacacgggagcagaacatggagcatgccatgaggctgcagcagtattccagtcgcttaacgcaggcagtgtccttcggatgtcagatgaagaaacccgacttgagccagagatcacgtccagttgagcccccaagcatggtatgcgcggaacaggaaccggaaccggaagttgaggaagatgacatggaaaatgagtacagcgttgaaacaatgacaatccatgacagaggagaaagtcttgcatcaggaggacctagaaagagaaggaaaaagaaagttcctaatgtacgcatcgccatccacaatgtgatcttgggaagaaccaacagcaaagaaattggtgaactgacagaatactttgagaggttcttcgaagtaaaatcattaacgacagaaaacgccgaatctggtgccgctggggtaggtgcttcaccaagcaaggagaacacgtctgagagaagccttcagtccagcgttcttcatctgcagcttgagccacttgaagaacaaggattccgctctaaggagaaattcttcactcatgttgttcagtcttggtgctctcgccccaggtcgcttcgatcggaaacagagaagctctggttacgtcgggatgaaacttcgcaaaatcaaaagtattccaaaccggtgctggttatcaagccagacgctttgtccttggggtactttttgaaccaggcccatttctgtatccactggccttttaacagcgctaagctggagaacattcgcgtcgcgttcgagcatgatcttcgaacaatgcttatttgtttcacggtgccaaatccgtacagtcaatggaaggctgatctatacaagcttcaagttcgctacagcgagctgcaagagttcgtgttggtcgacaaacggagttcgtcctcgatccatgagatcttcatctcattgcggcatcccccgcgcattttcaaagcgaagaatttcatcaagaaagaacaggatgatgacgaaaacgactttgaagaatggtacttcgaggacaacgactacgactttgatttcgatgacattcgtggcttcgacgacgagttctcgagcgattccgaagacgatcaagcagctaccgaagtcagccgcaacagcgccgacagttctgccgaagatgatcgcgaagctctcctgacaagctctgacgtcgcaagtattgatgacgtggtgaactgggagcgagtaactgaaatcgaagatagtggagaagcttttggtttgtgttgcgcgtacaattttacgttcaaagccagcgcatgggaagagattaaagaagtcctcagaagcattgctaaatatgacaagaagtccttctacctttccatgcgcaagtcttttagaagactgccagaggtggaaattccaaaagaactgccgttttcagtcaaatacaccgcgcagtgtttcctgaattcctttccgtttgtcaagggaagaatcacagctaagttcgcttctttgttgggaagcaaatctgaaaaagtaacgttggttgcgctagaaaggctcgctgcggctctccagaagaattcgttctgcgatgcagaagccaaacttgaaactctacttgacgagatgaattttaaaccaggtggaattccaaaacaacttcttcccgctcaatgttccatgatcaaacgcatggtcataacaccaactcgtttgctgttctacacaccggaagtcatgtctaagaaccgcgtactcaggcagtacaacacggatcaatttctctgcgtgaacgtacgtgatgaagacttctcgaagctttctgcagccggtgggggcatcgatcacgtgctggagcgtgtaaggcgcactttggacagcggggtgatcgcgggcggcgatcggtttctttacctggggtcgtccaatagtcagctgcgtaaccatggctgctggtttgttcgtcccagtccacatccggacgagatccgtgaatggatgggagacttcagcaagataaggtgcgtggccacatttatggctcgtatgggacagtgtttctcaacgtccctggacgcagtgggtatagacgtaaatgaagggacatcctgggatatggatgacgacattaaaactcctggcggaagttattgcttttcagatggcgtaggaagaatttccgaatcccttgcgcgtcaggttgccaaaaagatagccaaagacttcgtgccttccgcaatccaagttcgatttgctggatgcaaaggagttctgacgcaagatcccaggcttccgggcaataaagcgatttttcgtccgagcatgcgcaaatttgagagcagtcaccgacggcttgaggtgctacagacctctcgtccccaggtcgttttcttgaatcatcagctgattatgctgttgtcaaaccttggtgtcccggatgatgtctttatgaatttgcagcgcggcatgttggacagactggcaggaatgctggtcaatgaacgcctggctgctcagcagatgacgtcaggagccaagaccggcatcgcctacataagcctgtctcgagcaggaatacagctgaccactgaaccgtttttcaagtcactgttggtagcactatacaaggatcgtatgcagaatctactcagtcgagcccgcattctcctgccaacagcggaggctcgacttatgattggtgtcatggatgaaacggggagcttacagccaggcgaggtgtttgtgcagtattcggcgatttccaacgaccctgatcgcgaaggagaatttagcaaaactacaaaacacctcctcactggacccgtggtagtaaccagaaatccatgcctacatcccggagatgtgagactgctgaccgcagtggcagcgcctcaacttgttcatctggtggactgtgttgtgtttccgagtcacgggccccgtccccaccccagtgagatggcaggtggagaccttgatggtgatttgtactttgtttgctggaagaaggagctttttccacggaggaaactctttccaccaatgaactacgaagcgcttcccaagaaggaagttctggaaacaattacagtcagtcacatgaccaggtttgtagccgagtacatccggtttgatcagcttggcgtgattgacaacgcacacaaggcacaggctgattctcacgagggaggggtggaatcgtcgctttgtcttcaactagcggagcttcattcgcaagccgtcgacgcgccgaagaccggcaagtggacagaaatgcctaaagaagcaaaggtttcagtttttcctgactttatgatgaaatcggacaaaccaagttacccctcggacaagattttgggaaaattgtatcgcgagtgccgagcctttaaagacagcatcgccaaggaggtccctcttaagaaaccgcacatcgcacccacccttttagtgcccaactttcagaagtaccaagatgaggcgagggagctttatgaagagtactccagtcagctccagacattgatgaacctgtatggtatcgaaacggaagctgagcttttatcgggctgttttctcaaactccactctcgccttggaagggagaaagttgaaatcgctgatatcgtcagtcgcgttctgtccaaaatacgcgaaaattttcgcagtaagttcttcagggagtttgacttggacgaaggcaaacgaggggatgacgaggtcatttccgaaaatatgcaacgaaaagcttcggcctggtactacgtggcatacagtcacaagcaagcgacggatgctgcaacaaatgtcccggatggaaccccttcaatgcagttcttgagctttccatggcttgtcgatgacgtcatgttgtcaatcaggataggaagagcctttgaagtgcaagagtcgcaaagtatcgtggtgtcgattagcgagagtgttttgaaggtgtttgaagaggaaagagatgtccttttacaatgctttgaagacaggctgcagaaaaagaattttgtatctcgtgcgatgccaggagtcagcgtggccatgtttggttcttcagcgacgcttctcttccgacaagattctgaccttgacctttgcgtactcgatcccaagctcatcgcactgcgcagtcagatggatcatgacgagcagatcgctttattgaagaagatacacccagtaatgaagaagctgttcaaacatgcgagattggtggaatcagccaggatcccggtgatttcttgtgacaaccctgccaaacgagctggtccattggctaacgtaaccggcgacctttctgcctcctgggacggcctcctcaaagccattgtgctatcaagctacatcaagtcgtacccaggtctcttgccggttctccgactcctcctcaactggggtcacgtgacaggacttgcggggcatggtgttgacgctggcatcaagtcgaacgtgttggtattcctgttgcttatattctgcctctccaagagactggtgcagaacttcaacatggaaaatgtctggagtcgctgtttcgaaatttcaactggtcaagtgactgacgcatttctcattcatgaatggcgggaagttctagcatctttatccactttggaaaacaattcccttgttacaatcggcgatgaagaaattggggaaattctgctgacgtttttccaagcctacaacgcgaccctcgacatggaaattcctcaaccctttgcgtcattactgggcgtgcccaaactagcagaactgctggactcagagcacctgcgcctgctgaaagaacacatggaacgcgctttccatcttttggctctttacggagacgttgaagttcttcttacggtcagtgcatcagaaatcgaccgtgttattttcctatcagaggcgctgtcctacaccatggcgggctcagagaggcccaacgccttcgagttgtcaaagaagactggtgcgagagtaaccatacgtcccagtctccccggggcaggattcggccttgttcttcaagctattggtaccgagtctgctgtggcgtcagtggagagagcgcttaatgccatggcaacgcaggccttacgaaacaaggcggccattatgtcggtgtgctttgtgagggaagccaaacacatggtgatggaaggctgtcttagtgatgatgaccgtatcaccttggtaccgtactacgggaatcgccaccccacccatgacagtctggctttgtacgtgcccatgttggcaaacccgagatctggcctcagcaggataggggcggcgtacactcgatttgagtttctaggcttcaaggagaggtttctcactcaagttcaggtgatagaaagagatttcgtcccctcgattcatggtgaaatggaatttgcagtgcacttcggacgcatttatgttttgaatgtcccgaaatcatttacagaagacacagaatcgccgaccttgcgggtgtttcaaacaaatctgtcgcgaggctacaaacctcggccaagcgtgctgaccacgccaagaaatatcaacaaatacagcagaaagaacttcactgcaaaaggccgcaatttcaagaagcgaacgggcaacgaagtaggagaagacggcaaaaaggttccgaaagaaaaatcgtctcgaagctcctttttcacggttgtttcctcgctggagaaaatcacgagttttctggcgcaacgcgagtttaaagaagagcaaaggtcggaagattacttggttgaaattcacacggatcacgaattcatcgttatcatgaataaagatttcacgtttcgcgagataaggtatcccaaattgcgctggtgcgcggtagacgtgaaaagggcttggcgcgagaatcccgaggaacatgacgtcactgatttggacggaatcgagactgacgtacgcttcgtgttgcagacccgccatgcattgcgccccgatgacatacggggaactagttacgagcagtaccgcgatactttgcagcctcaacttcacccgaagccttcccgatgtccttttgtggtaaagccggaggtctggaaggacgcggcaatgattcgtcacaagaaatcccggatgtacaagttagaagagcacatggtgttggaaagcgagtttaggaaagggcttcgtatcagtgtgaacgaggttactgagtattctagacctactaagcacgcttctgccttcagtaaggtgttcacacgctgggaggtttctgtcaaaaccggtttacccaatagctggagcaatagtgaagctgtggagaagcttctgagagacatctgggcttttgccttcgctttggcctctcatttgtccgactag

Transcript

evm.model.Ap10.333

ATGGCACACAGAGGTTGCCTATTAACTCTTTACTGCAATCACTGCAGTACAGTCTTAGCCACACCGGATATGTTAATGCTGGCTACTGTTCCACCAACACAGACACATGTGACCATTAAAAAGGACAAAGAAGAACAAGCATACGCCGAGAAAATCCGGAAAATTCCCAACCCGGACCCCAAGAGAGCTGCGTTTTGTCCTTTTAAAGTTCTTTGCAAGAACTGCAATGAATACGTCGGAACTATCAGCATTGTTGAAGAGAATACACTTATTTGCTTCAAGATTGAAAACGTTCATTTCAAACGGGAATATGAAGAAATCCGAGGGAAGAAGCTAAAGCAGATCAAAGACAAGCTCTTGCAGTATGGCCTGGAAGTTGTGAATGTTTCTCAATTAAGAGAGACAGTTTCTCAAGCTGTTAAACAAAATTACATCCCTTCAGAGCCTCTCGTATATTGCGATATCAATATAACCACGGAGGAAATCCTGTCTTTTACCAAACAGATCCCCCGCGAATATCAAAGAGAGCTCTTTCTGCACGCCTTACGCGGAAACACGCTGGTCTACCTGCCCACGGGCTCGGGTAAGACCTTGATCGCGGCAATGGTTCTTAGCTGTATGAAGAAATTGAACCCAAAGAAACTGATGGTGTTTCTTGTCGACCGCATACCACTTGTCTATCAACAGAGTGACTACATCAAGTCCCAGGTCCCGGATCTAAGAGTCGAGATTTTGGCGGGAGATATTGGGCGTTTTCCAGGAGACAAAGCTCGTTGGATAGCTACTGTACAGGCGCTAAGTGAAAATAAAATTGATTTGCTAGTTTTGACGCATCAGATTCTGCTCAACTTAATGGGTGATGATCAGCCAGTGGTGCGTATGTCGGATATCTCTGTTCTCGTGTTTGATGAAGCCCACCACTGCCTTGGAAACCATCCCTATAATCAAATCATGAGGGATTTCTACAAAGGTACAAGCAACAGATTCAAGCCTCTGGTGCTAGCGCTGACCGCATCTCCTGCAGGCCTAGATACACCACAGTCTACGTCAAATAGATTGGAAGAGCTGCTTTCCAATCTCTGCGCGTGTGCGCGCATGCCTTTACGGTCAACCGATTTGGAGGTGTATTGGAACCGACCGGAAACTGCGTACGAGCTGGTTTCCATGAACACGAAGCAAAAGCTATTGCAATCATTTGTTGAGTCTTATCTCACTTCCTTGACAATGCAGATCGAAACGGAAGCGAAATTCCCACGTGCGCTGGACAAGCTAAACGTGCTGAAACCTAACTACCGTGGTGCTTTGCGCAAGTTGATTGAACGTTGTTATGGCGACAAGAACCGAGTGAAAGGCCTGGCACTAGGTGAGCACGCCATGCACATGCTCAGTGTGATTGAGGTGAATAACATTCTGGGCAACGAGTATGCGGTTGATTGTCTCGAAGAGTGCCTCAGGCAACTGCGATCGGCTACCTCTCCTATGGAACAGCTCAAGAAGAAGCTCATCGGTTCTTCGGCACAGCTGATGGTTCTAGAATCTTCGATCGCAAGCCTGAGGCGAGTTTCAAAGTTTTTCGCGTCCAGTGACAGGTATCAGCACCTTACCAAAGAGCTTCGGAATTTCATCCATCAAGTTGAAAGGGATGAAACTTCCAGGGGAATCATTTTCGTCAAGATGAGGAAGACTGCGTACAAACTCTGCGAACGGCTGAGACAGGAAACTGGAATCGCTGAAAAGCTGAACCCAGCCTTCCTCGTCGGCCACGGACAGGGAAGCGATGGAATGGACTGGAGAGGAGAACAGGAAGAAATCCTTAAGAAGTTTAGATCAGGCGAGGCAAAACTGCTTGTTAGCACGAGTGTATTGGAGGAGGGACTGGACGTTCCGGTTTGTAACCTGGTTATCCGGTTTGATAGCGCGCTGACATTGCGGGCACTGGTGCAGAGCCGCGGGCGTGCATCCCGCCGTCCCGACAGCCGTTTCGTGGTGATCTGCAGCGACTCCGACGAGCAAGGGAACGCTCTTGGTGCGATCACACGGGAGCAGAACATGGAGCATGCCATGAGGCTGCAGCAGTATTCCAGTCGCTTAACGCAGGCAGTGTCCTTCGGATGTCAGATGAAGAAACCCGACTTGAGCCAGAGATCACGTCCAGTTGAGCCCCCAAGCATGGTATGCGCGGAACAGGAACCGGAACCGGAAGTTGAGGAAGATGACATGGAAAATGAGTACAGCGTTGAAACAATGACAATCCATGACAGAGGAGAAAGTCTTGCATCAGGAGGACCTAGAAAGAGAAGGAAAAAGAAAGTTCCTAATGTACGCATCGCCATCCACAATGTGATCTTGGGAAGAACCAACAGCAAAGAAATTGGTGAACTGACAGAATACTTTGAGAGGTTCTTCGAAGTAAAATCATTAACGACAGAAAACGCCGAATCTGGTGCCGCTGGGGTAGGTGCTTCACCAAGCAAGGAGAACACGTCTGAGAGAAGCCTTCAGTCCAGCGTTCTTCATCTGCAGCTTGAGCCACTTGAAGAACAAGGATTCCGCTCTAAGGAGAAATTCTTCACTCATGTTGTTCAGTCTTGGTGCTCTCGCCCCAGGTCGCTTCGATCGGAAACAGAGAAGCTCTGGTTACGTCGGGATGAAACTTCGCAAAATCAAAAGTATTCCAAACCGGTGCTGGTTATCAAGCCAGACGCTTTGTCCTTGGGGTACTTTTTGAACCAGGCCCATTTCTGTATCCACTGGCCTTTTAACAGCGCTAAGCTGGAGAACATTCGCGTCGCGTTCGAGCATGATCTTCGAACAATGCTTATTTGTTTCACGGTGCCAAATCCGTACAGTCAATGGAAGGCTGATCTATACAAGCTTCAAGTTCGCTACAGCGAGCTGCAAGAGTTCGTGTTGGTCGACAAACGGAGTTCGTCCTCGATCCATGAGATCTTCATCTCATTGCGGCATCCCCCGCGCATTTTCAAAGCGAAGAATTTCATCAAGAAAGAACAGGATGATGACGAAAACGACTTTGAAGAATGGTACTTCGAGGACAACGACTACGACTTTGATTTCGATGACATTCGTGGCTTCGACGACGAGTTCTCGAGCGATTCCGAAGACGATCAAGCAGCTACCGAAGTCAGCCGCAACAGCGCCGACAGTTCTGCCGAAGATGATCGCGAAGCTCTCCTGACAAGCTCTGACGTCGCAAGTATTGATGACGTGGTGAACTGGGAGCGAGTAACTGAAATCGAAGATAGTGGAGAAGCTTTTGGTTTGTGTTGCGCGTACAATTTTACGTTCAAAGCCAGCGCATGGGAAGAGATTAAAGAAGTCCTCAGAAGCATTGCTAAATATGACAAGAAGTCCTTCTACCTTTCCATGCGCAAGTCTTTTAGAAGACTGCCAGAGGTGGAAATTCCAAAAGAACTGCCGTTTTCAGTCAAATACACCGCGCAGTGTTTCCTGAATTCCTTTCCGTTTGTCAAGGGAAGAATCACAGCTAAGTTCGCTTCTTTGTTGGGAAGCAAATCTGAAAAAGTAACGTTGGTTGCGCTAGAAAGGCTCGCTGCGGCTCTCCAGAAGAATTCGTTCTGCGATGCAGAAGCCAAACTTGAAACTCTACTTGACGAGATGAATTTTAAACCAGGTGGAATTCCAAAACAACTTCTTCCCGCTCAATGTTCCATGATCAAACGCATGGTCATAACACCAACTCGTTTGCTGTTCTACACACCGGAAGTCATGTCTAAGAACCGCGTACTCAGGCAGTACAACACGGATCAATTTCTCTGCGTGAACGTACGTGATGAAGACTTCTCGAAGCTTTCTGCAGCCGGTGGGGGCATCGATCACGTGCTGGAGCGTGTAAGGCGCACTTTGGACAGCGGGGTGATCGCGGGCGGCGATCGGTTTCTTTACCTGGGGTCGTCCAATAGTCAGCTGCGTAACCATGGCTGCTGGTTTGTTCGTCCCAGTCCACATCCGGACGAGATCCGTGAATGGATGGGAGACTTCAGCAAGATAAGGTGCGTGGCCACATTTATGGCTCGTATGGGACAGTGTTTCTCAACGTCCCTGGACGCAGTGGGTATAGACGTAAATGAAGGGACATCCTGGGATATGGATGACGACATTAAAACTCCTGGCGGAAGTTATTGCTTTTCAGATGGCGTAGGAAGAATTTCCGAATCCCTTGCGCGTCAGGTTGCCAAAAAGATAGCCAAAGACTTCGTGCCTTCCGCAATCCAAGTTCGATTTGCTGGATGCAAAGGAGTTCTGACGCAAGATCCCAGGCTTCCGGGCAATAAAGCGATTTTTCGTCCGAGCATGCGCAAATTTGAGAGCAGTCACCGACGGCTTGAGGTGCTACAGACCTCTCGTCCCCAGGTCGTTTTCTTGAATCATCAGCTGATTATGCTGTTGTCAAACCTTGGTGTCCCGGATGATGTCTTTATGAATTTGCAGCGCGGCATGTTGGACAGACTGGCAGGAATGCTGGTCAATGAACGCCTGGCTGCTCAGCAGATGACGTCAGGAGCCAAGACCGGCATCGCCTACATAAGCCTGTCTCGAGCAGGAATACAGCTGACCACTGAACCGTTTTTCAAGTCACTGTTGGTAGCACTATACAAGGATCGTATGCAGAATCTACTCAGTCGAGCCCGCATTCTCCTGCCAACAGCGGAGGCTCGACTTATGATTGGTGTCATGGATGAAACGGGGAGCTTACAGCCAGGCGAGGTGTTTGTGCAGTATTCGGCGATTTCCAACGACCCTGATCGCGAAGGAGAATTTAGCAAAACTACAAAACACCTCCTCACTGGACCCGTGGTAGTAACCAGAAATCCATGCCTACATCCCGGAGATGTGAGACTGCTGACCGCAGTGGCAGCGCCTCAACTTGTTCATCTGGTGGACTGTGTTGTGTTTCCGAGTCACGGGCCCCGTCCCCACCCCAGTGAGATGGCAGGTGGAGACCTTGATGGTGATTTGTACTTTGTTTGCTGGAAGAAGGAGCTTTTTCCACGGAGGAAACTCTTTCCACCAATGAACTACGAAGCGCTTCCCAAGAAGGAAGTTCTGGAAACAATTACAGTCAGTCACATGACCAGGTTTGTAGCCGAGTACATCCGGTTTGATCAGCTTGGCGTGATTGACAACGCACACAAGGCACAGGCTGATTCTCACGAGGGAGGGGTGGAATCGTCGCTTTGTCTTCAACTAGCGGAGCTTCATTCGCAAGCCGTCGACGCGCCGAAGACCGGCAAGTGGACAGAAATGCCTAAAGAAGCAAAGGTTTCAGTTTTTCCTGACTTTATGATGAAATCGGACAAACCAAGTTACCCCTCGGACAAGATTTTGGGAAAATTGTATCGCGAGTGCCGAGCCTTTAAAGACAGCATCGCCAAGGAGGTCCCTCTTAAGAAACCGCACATCGCACCCACCCTTTTAGTGCCCAACTTTCAGAAGTACCAAGATGAGGCGAGGGAGCTTTATGAAGAGTACTCCAGTCAGCTCCAGACATTGATGAACCTGTATGGTATCGAAACGGAAGCTGAGCTTTTATCGGGCTGTTTTCTCAAACTCCACTCTCGCCTTGGAAGGGAGAAAGTTGAAATCGCTGATATCGTCAGTCGCGTTCTGTCCAAAATACGCGAAAATTTTCGCAGTAAGTTCTTCAGGGAGTTTGACTTGGACGAAGGCAAACGAGGGGATGACGAGGTCATTTCCGAAAATATGCAACGAAAAGCTTCGGCCTGGTACTACGTGGCATACAGTCACAAGCAAGCGACGGATGCTGCAACAAATGTCCCGGATGGAACCCCTTCAATGCAGTTCTTGAGCTTTCCATGGCTTGTCGATGACGTCATGTTGTCAATCAGGATAGGAAGAGCCTTTGAAGTGCAAGAGTCGCAAAGTATCGTGGTGTCGATTAGCGAGAGTGTTTTGAAGGTGTTTGAAGAGGAAAGAGATGTCCTTTTACAATGCTTTGAAGACAGGCTGCAGAAAAAGAATTTTGTATCTCGTGCGATGCCAGGAGTCAGCGTGGCCATGTTTGGTTCTTCAGCGACGCTTCTCTTCCGACAAGATTCTGACCTTGACCTTTGCGTACTCGATCCCAAGCTCATCGCACTGCGCAGTCAGATGGATCATGACGAGCAGATCGCTTTATTGAAGAAGATACACCCAGTAATGAAGAAGCTGTTCAAACATGCGAGATTGGTGGAATCAGCCAGGATCCCGGTGATTTCTTGTGACAACCCTGCCAAACGAGCTGGTCCATTGGCTAACGTAACCGGCGACCTTTCTGCCTCCTGGGACGGCCTCCTCAAAGCCATTGTGCTATCAAGCTACATCAAGTCGTACCCAGGTCTCTTGCCGGTTCTCCGACTCCTCCTCAACTGGGGTCACGTGACAGGACTTGCGGGGCATGGTGTTGACGCTGGCATCAAGTCGAACGTGTTGGTATTCCTGTTGCTTATATTCTGCCTCTCCAAGAGACTGGTGCAGAACTTCAACATGGAAAATGTCTGGAGTCGCTGTTTCGAAATTTCAACTGGTCAAGTGACTGACGCATTTCTCATTCATGAATGGCGGGAAGTTCTAGCATCTTTATCCACTTTGGAAAACAATTCCCTTGTTACAATCGGCGATGAAGAAATTGGGGAAATTCTGCTGACGTTTTTCCAAGCCTACAACGCGACCCTCGACATGGAAATTCCTCAACCCTTTGCGTCATTACTGGGCGTGCCCAAACTAGCAGAACTGCTGGACTCAGAGCACCTGCGCCTGCTGAAAGAACACATGGAACGCGCTTTCCATCTTTTGGCTCTTTACGGAGACGTTGAAGTTCTTCTTACGGTCAGTGCATCAGAAATCGACCGTGTTATTTTCCTATCAGAGGCGCTGTCCTACACCATGGCGGGCTCAGAGAGGCCCAACGCCTTCGAGTTGTCAAAGAAGACTGGTGCGAGAGTAACCATACGTCCCAGTCTCCCCGGGGCAGGATTCGGCCTTGTTCTTCAAGCTATTGGTACCGAGTCTGCTGTGGCGTCAGTGGAGAGAGCGCTTAATGCCATGGCAACGCAGGCCTTACGAAACAAGGCGGCCATTATGTCGGTGTGCTTTGTGAGGGAAGCCAAACACATGGTGATGGAAGGCTGTCTTAGTGATGATGACCGTATCACCTTGGTACCGTACTACGGGAATCGCCACCCCACCCATGACAGTCTGGCTTTGTACGTGCCCATGTTGGCAAACCCGAGATCTGGCCTCAGCAGGATAGGGGCGGCGTACACTCGATTTGAGTTTCTAGGCTTCAAGGAGAGGTTTCTCACTCAAGTTCAGGTGATAGAAAGAGATTTCGTCCCCTCGATTCATGGTGAAATGGAATTTGCAGTGCACTTCGGACGCATTTATGTTTTGAATGTCCCGAAATCATTTACAGAAGACACAGAATCGCCGACCTTGCGGGTGTTTCAAACAAATCTGTCGCGAGGCTACAAACCTCGGCCAAGCGTGCTGACCACGCCAAGAAATATCAACAAATACAGCAGAAAGAACTTCACTGCAAAAGGCCGCAATTTCAAGAAGCGAACGGGCAACGAAGTAGGAGAAGACGGCAAAAAGGTTCCGAAAGAAAAATCGTCTCGAAGCTCCTTTTTCACGGTTGTTTCCTCGCTGGAGAAAATCACGAGTTTTCTGGCGCAACGCGAGTTTAAAGAAGAGCAAAGGTCGGAAGATTACTTGGTTGAAATTCACACGGATCACGAATTCATCGTTATCATGAATAAAGATTTCACGTTTCGCGAGATAAGGTATCCCAAATTGCGCTGGTGCGCGGTAGACGTGAAAAGGGCTTGGCGCGAGAATCCCGAGGAACATGACGTCACTGATTTGGACGGAATCGAGACTGACGTACGCTTCGTGTTGCAGACCCGCCATGCATTGCGCCCCGATGACATACGGGGAACTAGTTACGAGCAGTACCGCGATACTTTGCAGCCTCAACTTCACCCGAAGCCTTCCCGATGTCCTTTTGTGGTAAAGCCGGAGGTCTGGAAGGACGCGGCAATGATTCGTCACAAGAAATCCCGGATGTACAAGTTAGAAGAGCACATGGTGTTGGAAAGCGAGTTTAGGAAAGGGCTTCGTATCAGTGTGAACGAGGTTACTGAGTATTCTAGACCTACTAAGCACGCTTCTGCCTTCAGTAAGGTGTTCACACGCTGGGAGGTTTCTGTCAAAACCGGTTTACCCAATAGCTGGAGCAATAGTGAAGCTGTGGAGAAGCTTCTGAGAGACATCTGGGCTTTTGCCTTCGCTTTGGCCTCTCATTTGTCCGACTAG

Protein

evm.model.Ap10.333

MAHRGCLLTLYCNHCSTVLATPDMLMLATVPPTQTHVTIKKDKEEQAYAEKIRKIPNPDPKRAAFCPFKVLCKNCNEYVGTISIVEENTLICFKIENVHFKREYEEIRGKKLKQIKDKLLQYGLEVVNVSQLRETVSQAVKQNYIPSEPLVYCDINITTEEILSFTKQIPREYQRELFLHALRGNTLVYLPTGSGKTLIAAMVLSCMKKLNPKKLMVFLVDRIPLVYQQSDYIKSQVPDLRVEILAGDIGRFPGDKARWIATVQALSENKIDLLVLTHQILLNLMGDDQPVVRMSDISVLVFDEAHHCLGNHPYNQIMRDFYKGTSNRFKPLVLALTASPAGLDTPQSTSNRLEELLSNLCACARMPLRSTDLEVYWNRPETAYELVSMNTKQKLLQSFVESYLTSLTMQIETEAKFPRALDKLNVLKPNYRGALRKLIERCYGDKNRVKGLALGEHAMHMLSVIEVNNILGNEYAVDCLEECLRQLRSATSPMEQLKKKLIGSSAQLMVLESSIASLRRVSKFFASSDRYQHLTKELRNFIHQVERDETSRGIIFVKMRKTAYKLCERLRQETGIAEKLNPAFLVGHGQGSDGMDWRGEQEEILKKFRSGEAKLLVSTSVLEEGLDVPVCNLVIRFDSALTLRALVQSRGRASRRPDSRFVVICSDSDEQGNALGAITREQNMEHAMRLQQYSSRLTQAVSFGCQMKKPDLSQRSRPVEPPSMVCAEQEPEPEVEEDDMENEYSVETMTIHDRGESLASGGPRKRRKKKVPNVRIAIHNVILGRTNSKEIGELTEYFERFFEVKSLTTENAESGAAGVGASPSKENTSERSLQSSVLHLQLEPLEEQGFRSKEKFFTHVVQSWCSRPRSLRSETEKLWLRRDETSQNQKYSKPVLVIKPDALSLGYFLNQAHFCIHWPFNSAKLENIRVAFEHDLRTMLICFTVPNPYSQWKADLYKLQVRYSELQEFVLVDKRSSSSIHEIFISLRHPPRIFKAKNFIKKEQDDDENDFEEWYFEDNDYDFDFDDIRGFDDEFSSDSEDDQAATEVSRNSADSSAEDDREALLTSSDVASIDDVVNWERVTEIEDSGEAFGLCCAYNFTFKASAWEEIKEVLRSIAKYDKKSFYLSMRKSFRRLPEVEIPKELPFSVKYTAQCFLNSFPFVKGRITAKFASLLGSKSEKVTLVALERLAAALQKNSFCDAEAKLETLLDEMNFKPGGIPKQLLPAQCSMIKRMVITPTRLLFYTPEVMSKNRVLRQYNTDQFLCVNVRDEDFSKLSAAGGGIDHVLERVRRTLDSGVIAGGDRFLYLGSSNSQLRNHGCWFVRPSPHPDEIREWMGDFSKIRCVATFMARMGQCFSTSLDAVGIDVNEGTSWDMDDDIKTPGGSYCFSDGVGRISESLARQVAKKIAKDFVPSAIQVRFAGCKGVLTQDPRLPGNKAIFRPSMRKFESSHRRLEVLQTSRPQVVFLNHQLIMLLSNLGVPDDVFMNLQRGMLDRLAGMLVNERLAAQQMTSGAKTGIAYISLSRAGIQLTTEPFFKSLLVALYKDRMQNLLSRARILLPTAEARLMIGVMDETGSLQPGEVFVQYSAISNDPDREGEFSKTTKHLLTGPVVVTRNPCLHPGDVRLLTAVAAPQLVHLVDCVVFPSHGPRPHPSEMAGGDLDGDLYFVCWKKELFPRRKLFPPMNYEALPKKEVLETITVSHMTRFVAEYIRFDQLGVIDNAHKAQADSHEGGVESSLCLQLAELHSQAVDAPKTGKWTEMPKEAKVSVFPDFMMKSDKPSYPSDKILGKLYRECRAFKDSIAKEVPLKKPHIAPTLLVPNFQKYQDEARELYEEYSSQLQTLMNLYGIETEAELLSGCFLKLHSRLGREKVEIADIVSRVLSKIRENFRSKFFREFDLDEGKRGDDEVISENMQRKASAWYYVAYSHKQATDAATNVPDGTPSMQFLSFPWLVDDVMLSIRIGRAFEVQESQSIVVSISESVLKVFEEERDVLLQCFEDRLQKKNFVSRAMPGVSVAMFGSSATLLFRQDSDLDLCVLDPKLIALRSQMDHDEQIALLKKIHPVMKKLFKHARLVESARIPVISCDNPAKRAGPLANVTGDLSASWDGLLKAIVLSSYIKSYPGLLPVLRLLLNWGHVTGLAGHGVDAGIKSNVLVFLLLIFCLSKRLVQNFNMENVWSRCFEISTGQVTDAFLIHEWREVLASLSTLENNSLVTIGDEEIGEILLTFFQAYNATLDMEIPQPFASLLGVPKLAELLDSEHLRLLKEHMERAFHLLALYGDVEVLLTVSASEIDRVIFLSEALSYTMAGSERPNAFELSKKTGARVTIRPSLPGAGFGLVLQAIGTESAVASVERALNAMATQALRNKAAIMSVCFVREAKHMVMEGCLSDDDRITLVPYYGNRHPTHDSLALYVPMLANPRSGLSRIGAAYTRFEFLGFKERFLTQVQVIERDFVPSIHGEMEFAVHFGRIYVLNVPKSFTEDTESPTLRVFQTNLSRGYKPRPSVLTTPRNINKYSRKNFTAKGRNFKKRTGNEVGEDGKKVPKEKSSRSSFFTVVSSLEKITSFLAQREFKEEQRSEDYLVEIHTDHEFIVIMNKDFTFREIRYPKLRWCAVDVKRAWRENPEEHDVTDLDGIETDVRFVLQTRHALRPDDIRGTSYEQYRDTLQPQLHPKPSRCPFVVKPEVWKDAAMIRHKKSRMYKLEEHMVLESEFRKGLRISVNEVTEYSRPTKHASAFSKVFTRWEVSVKTGLPNSWSNSEAVEKLLRDIWAFAFALASHLSD*

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q0DXS3	Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2
Q8LHH9	Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHL2 PE=2 SV=1
Q9LQV2	RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000941 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00271 all species →	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF04851 all species →	ResIII	Type III restriction enzyme, res subunit	Family	Interproscan
PF05183 all species →	RdRP	RNA dependent RNA polymerase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001650 all species →	Domain	Helicase, C-terminal domain-like	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR043519 all species →	Homologous_superfamily	Nucleotidyltransferase superfamily	Interproscan
IPR014001 all species →	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR007855 all species →	Family	RNA-dependent RNA polymerase, eukaryotic-type	Interproscan
IPR038557 all species →	Homologous_superfamily	RIG-I-like receptor, C-terminal domain superfamily	Interproscan
IPR006935 all species →	Domain	Helicase/UvrB, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23079 all species →	RNA-DEPENDENT RNA POLYMERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003968 all species →	Molecular Function	RNA-dependent RNA polymerase activity	Interproscan
GO:0030422 all species →	Biological Process	siRNA processing	Interproscan
GO:0031380 all species →	Cellular Component	nuclear RNA-directed RNA polymerase complex	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap10.333.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.