Detailed information of evm.model.Ap10.361 in Astrangia poculata

Genomic Location: Ap10:3737902...3741490
NR annotation: KAJ7331211.1, hypothetical protein OS493_019992 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9P202Whirlin OS=Homo sapiens OX=9606 GN=WHRN PE=1 SV=4
Q810W9Whirlin OS=Rattus norvegicus OX=10116 GN=Whrn PE=1 SV=1
Q80VW5Whirlin OS=Mus musculus OX=10090 GN=Whrn PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010497 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595
all species →		PDZPDZ domainDomainInterproscan
PF17820
all species →		PDZ_6PDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001478
all species →		DomainPDZ domainInterproscan
IPR051844
all species →		FamilySensory Perception USH2 Complex ProteinInterproscan
IPR036034
all species →		Homologous_superfamilyPDZ superfamilyInterproscan
IPR003124
all species →		DomainWH2 domainInterproscan
IPR041489
all species →		DomainPDZ domain 6Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23116
all species →		PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0002142
all species →		Cellular Componentstereocilia ankle link complexInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0005929
all species →		Cellular ComponentciliumInterproscan
GO:0032426
all species →		Cellular Componentstereocilium tipInterproscan
GO:0003779
all species →		Molecular Functionactin bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap10.361.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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