Gene detail

Detailed information of evm.model.Ap10.395 in Astrangia poculata

Genomic Location: Ap10:4154681...4179853
NR annotation: CAH3112452.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap10.395

atggcgagagcattggacgagcgatctaagaagttcatcgatgcggtccaatctgatcttagagctttgtcgaacgagacaagacgaaaattccagccggttaaagaggcggcagaagctgggatcttacgcctcagaactattagtgctgccaaggcaagaaatttgaagataacaaaagtgattgctgaagagactgagatagtccaacctttcttgcttggctgtgatacaaagagtctccgtgtggtgcagatttcactgacagctcttcagcggctcataaccaatgaggctctttctgagtcctctgccattaacctggttagttcattatggcaattgatggaaggaggtttagaagagctaagaatcctgcagacaatcattcttctcataacaacatcaaatattgttcatggggaaagtcttggaaaggctatggtcttgtgttttaagttgtacttcataaaagatgcaaccatctgtaccactgctgccgctactgtcagacagatggtgtcggtgatatttgaaagggttgtcacagaggatagtcaaggcttagcttctcagaaagttgaggacactgcagggtctatcagacacaagaactgtcctgttagtcttcacccatgtgctagggatgcttatctgctttttcaggatctgtgccaactcacaaatggtgagcaaccttactggttgattggtatcactgagatgacgagaacatttggactggagctgctagagagtgtgctcaagggataccccaacatatttcttaaacatcctgaatttagctttctcctgaaggaacgagtctgtccactgatcatcaagctgttctctccaagcatcaaacatcgtattagctctgctccattggagaaacctctgtaccctgtggcagttagacttctaagaattgtctctgtcttgattgaaaaattttatactcttttggtgaccgagtgcgagatattcctgtctctcttggtgaagtttctggagcctgataaacctcagtggcaaagagcattggctcttgaagtcctccatactcttacaatccagcctgccctactcaggtcattttgtctgttttatgacatgcaagagcattcaacaagaatcttccacgacatggtgaatgcactgacaagcttcacacagggtctctttaccaatcagtccacccacagctcatcacagagtgccgcacacttacccagtgccaacacaatccaaaccccctccagtgccccacccccctcagtcgtggcgctgagtgcaatgggcggggtcactccacagcctgggttctcatacaggggtgcatggatacccctggctgttatgcctgtttatggacaagctaaacctgtttatctggaacagttggaaagaccagagtgttctgcaatctctgagggctacacactgtccattgcctttgcctgtttgctggagatcgtcaaaagtcttgacgtacttgtgcaagaaaacagcagtccgtcaaatgcaggagaagtggttggttggattgaacctgaagtgcatggaacagccattgaaacaggggtggggacagatactatcagagctgccgctaaagaaggtgtcgaaagtgacaaaggaacaagcacaccagacttatttcaggagatggtgtcagcttcttggtgtggagtgttggcctcactatctttacttttagaagcaagtaatgatgaaactgccacagaaaccatactcaaatcctaccagctgtattcaaacgtttgtggtatcctaaatctcactactccaagagatgcttttatcacgtcgctttgcaaggcagcactacccccacactacaccctgacggtacttaatccacactctggtaccgcacaggtctcttttgttaagatgccaatgagtggatctcaggcccttttagaatcacaaggaggagatcacaggggcctgggtagatcactgtctggctcaggagagactgggtctggtgctgttgtcacaggggtcccacttggttccagtcatggtcctgtgtctcttacagcaaagaacatccagtgtatgcgctcattgctaagcctggcacactgccatggaggaattctgggtacagcctggcacatggttctcaccacactacagcatctgacatggatcctgggactcaagccatctgcaggaggcacgctgaaagccatgccagccagtgaggctcctaacttggtcattacccaagcaatgatggctgaactgcctgttctagctgcaatcttatcaaggcttttcgaaacatccaagtatctggatgatgtggctcttcaccatcttgtagatgcactttgcagattatccaccacatctatggagcaagcacagaccaacaaggaaccctctctcttcgctgtggccaagctgttggaaacaggtttaaataacctccaccgcgcacgcgtcttgtggaagccgctgactgcacatctgttggaggtatgccagcactctcatgctaaaatgcgcgagtggggggccgaggctgtgacgtcactagttcgttcagctctgacgcatgaccatgatcctcctttgaaacaagacctgcaattacagtccatgattctgagtcctctccaagaaatgtcaaatgtcagtttttcagacattcgctacaagcaattagaatgtgttcttcagattcttcactctaccgggcaaaaccttggtcaaggatggctctgtgtgctaggagtaatcggtgctgctaccaatcaacaaggcgagggtctaattcgcgtggcattccaaagcttacagcttgtggtgacggatttccttcccttgatgccttgcacgtgtatcaaggtcgtggttgacgtggcgggaaaatttggcctgcagccacaagagctgaacattagcttgacagccattggtctgttgtggaatatatctgattttctttcgcaacaccgtgacacgattcgcaccgagctagaaaaagctgagagtgccgcgactgacaataccaagtatgacagaccagttcccccatcagaccgacagtggatgtgcctgtactccaaacttggcgagctgtgcgttgatcctcggccaccagtcaggaaaagcgcgggacagacgctgttctcgactattagtgcgcatggctcgttactggagaatgtcacgtggtacacagtcctttggcgggtgctgtttccgttactggagcaagtcaagacaatgtccacctcagcagctgatgtcccgccaccaagcgacgccgtcaactcaaagggtaaaatcctcattcaccattcacgtgatacagctgaaaaacaatgggcggaaacacgtgttctgaccttgagcggcgtggcgcgcgtgttcaacaaccggcgccaaattttggcgggtcttgatgagttcccgcgcgcgtgggcgcttcttttggagtttgtcgagtctgcagcgctgagcaagtccgctgaagtcgcactggcggctcttaaaagctttcaggatatcgttcaagattcgagtgaaagtcaggagagtgctggcgcaaattccagcccaggagaaaccggaagagagaaaaaagcagctaaaactgctgctagacttaaagtaaagcctaaattttgccaggcagcggacgaagatttaaatctatggacgaatgcttggcgtgtgtggtataacatcggtacaacaagtatgtccgaggcacacattgtcagaacaagacgagattcctcaggcaaactcatcacaactagaacttaccctgcacaggcgtttcttgcagccctggtgcaaatttttccttctcttttcatgagaatatacggccgttttggcttagcagatttgcagaaacttgtcagaattctacaaacttctgtcacaattcctgtaccggtagatcaatcaccgtttttagtaccatcattccaggatactgtgctaacacccttacaacacgctattttggacgctattgagattctacgcgagcctcttccgaattcctccgggtcagtccttcacgtctctaaacaaccaatgtaccctacactattttcgctgcttcttcagttctttgattgtgctacagagcctccacgcgttgatgagctatctgatggagatagcgcttctagacggaaaaagaaagaatggattattctgtcgcttactcctttctcggagaaatgtctggagatggttatggcgttgtataatgagtgtttctcacagccagccgtgatggaagagaaagtgttggagaaaatcattaagtccctgcgcaatcctcttcgcctcaagtacagttgctcgtcccagtccacctggaagctagctgtggattcgttgatgactgttattcgcaaaggactcactgtggccctcgcacgcccagattcctttagatcaatgtggtacgaattagcgtcggcgctggaggacttcctcttctcagatatgagtcccccagagaaccagtctcttgaacagcatcaagcggatgaagaactggacatcaagcttttgcgcatgatccgtgaagagattctgccccattccgctgctcttccaaaagacttcatggcgcgggtcatggcgctactgaaccgaggctcaatacactcagctgcagatgccaccttcagtggaacggatgccaacggatttcctcttcgtgaagagtttgccaagtcatgttttgaaactctgttacagttttcatttgtaaatggcacaccagaagtggatcaacgcgtagaacaacctgacggtaaagtatctgagttagcgctggatgctcttcttagaagatgtagtgacgtgctggtcaagtacgtcgaggacgaaaaacttagtggaaaatgtcctttaccaagaacccgtatggctgagatgtcttttgttatgaaagctatcagtacattactgtcttccttaaaaagagctgttcaagaaaatcctacagttgtggacggaaagatctgggaacaagtggttgagttgtaccctcgtcttgtggaatgttccgtatgtaactccacccctgtccgacgagccttgcgggaagcgttacaagagtacgctgaccttatcaaaccgccgattcatccatctgccgtgaatggtaaacgatag

Transcript

evm.model.Ap10.395

ATGGCGAGAGCATTGGACGAGCGATCTAAGAAGTTCATCGATGCGGTCCAATCTGATCTTAGAGCTTTGTCGAACGAGACAAGACGAAAATTCCAGCCGGTTAAAGAGGCGGCAGAAGCTGGGATCTTACGCCTCAGAACTATTAGTGCTGCCAAGGCAAGAAATTTGAAGATAACAAAAGTGATTGCTGAAGAGACTGAGATAGTCCAACCTTTCTTGCTTGGCTGTGATACAAAGAGTCTCCGTGTGGTGCAGATTTCACTGACAGCTCTTCAGCGGCTCATAACCAATGAGGCTCTTTCTGAGTCCTCTGCCATTAACCTGGTTAGTTCATTATGGCAATTGATGGAAGGAGGTTTAGAAGAGCTAAGAATCCTGCAGACAATCATTCTTCTCATAACAACATCAAATATTGTTCATGGGGAAAGTCTTGGAAAGGCTATGGTCTTGTGTTTTAAGTTGTACTTCATAAAAGATGCAACCATCTGTACCACTGCTGCCGCTACTGTCAGACAGATGGTGTCGGTGATATTTGAAAGGGTTGTCACAGAGGATAGTCAAGGCTTAGCTTCTCAGAAAGTTGAGGACACTGCAGGGTCTATCAGACACAAGAACTGTCCTGTTAGTCTTCACCCATGTGCTAGGGATGCTTATCTGCTTTTTCAGGATCTGTGCCAACTCACAAATGGTGAGCAACCTTACTGGTTGATTGGTATCACTGAGATGACGAGAACATTTGGACTGGAGCTGCTAGAGAGTGTGCTCAAGGGATACCCCAACATATTTCTTAAACATCCTGAATTTAGCTTTCTCCTGAAGGAACGAGTCTGTCCACTGATCATCAAGCTGTTCTCTCCAAGCATCAAACATCGTATTAGCTCTGCTCCATTGGAGAAACCTCTGTACCCTGTGGCAGTTAGACTTCTAAGAATTGTCTCTGTCTTGATTGAAAAATTTTATACTCTTTTGGTGACCGAGTGCGAGATATTCCTGTCTCTCTTGGTGAAGTTTCTGGAGCCTGATAAACCTCAGTGGCAAAGAGCATTGGCTCTTGAAGTCCTCCATACTCTTACAATCCAGCCTGCCCTACTCAGGTCATTTTGTCTGTTTTATGACATGCAAGAGCATTCAACAAGAATCTTCCACGACATGGTGAATGCACTGACAAGCTTCACACAGGGTCTCTTTACCAATCAGTCCACCCACAGCTCATCACAGAGTGCCGCACACTTACCCAGTGCCAACACAATCCAAACCCCCTCCAGTGCCCCACCCCCCTCAGTCGTGGCGCTGAGTGCAATGGGCGGGGTCACTCCACAGCCTGGGTTCTCATACAGGGGTGCATGGATACCCCTGGCTGTTATGCCTGTTTATGGACAAGCTAAACCTGTTTATCTGGAACAGTTGGAAAGACCAGAGTGTTCTGCAATCTCTGAGGGCTACACACTGTCCATTGCCTTTGCCTGTTTGCTGGAGATCGTCAAAAGTCTTGACGTACTTGTGCAAGAAAACAGCAGTCCGTCAAATGCAGGAGAAGTGGTTGGTTGGATTGAACCTGAAGTGCATGGAACAGCCATTGAAACAGGGGTGGGGACAGATACTATCAGAGCTGCCGCTAAAGAAGGTGTCGAAAGTGACAAAGGAACAAGCACACCAGACTTATTTCAGGAGATGGTGTCAGCTTCTTGGTGTGGAGTGTTGGCCTCACTATCTTTACTTTTAGAAGCAAGTAATGATGAAACTGCCACAGAAACCATACTCAAATCCTACCAGCTGTATTCAAACGTTTGTGGTATCCTAAATCTCACTACTCCAAGAGATGCTTTTATCACGTCGCTTTGCAAGGCAGCACTACCCCCACACTACACCCTGACGGTACTTAATCCACACTCTGGTACCGCACAGGTCTCTTTTGTTAAGATGCCAATGAGTGGATCTCAGGCCCTTTTAGAATCACAAGGAGGAGATCACAGGGGCCTGGGTAGATCACTGTCTGGCTCAGGAGAGACTGGGTCTGGTGCTGTTGTCACAGGGGTCCCACTTGGTTCCAGTCATGGTCCTGTGTCTCTTACAGCAAAGAACATCCAGTGTATGCGCTCATTGCTAAGCCTGGCACACTGCCATGGAGGAATTCTGGGTACAGCCTGGCACATGGTTCTCACCACACTACAGCATCTGACATGGATCCTGGGACTCAAGCCATCTGCAGGAGGCACGCTGAAAGCCATGCCAGCCAGTGAGGCTCCTAACTTGGTCATTACCCAAGCAATGATGGCTGAACTGCCTGTTCTAGCTGCAATCTTATCAAGGCTTTTCGAAACATCCAAGTATCTGGATGATGTGGCTCTTCACCATCTTGTAGATGCACTTTGCAGATTATCCACCACATCTATGGAGCAAGCACAGACCAACAAGGAACCCTCTCTCTTCGCTGTGGCCAAGCTGTTGGAAACAGGTTTAAATAACCTCCACCGCGCACGCGTCTTGTGGAAGCCGCTGACTGCACATCTGTTGGAGGTATGCCAGCACTCTCATGCTAAAATGCGCGAGTGGGGGGCCGAGGCTGTGACGTCACTAGTTCGTTCAGCTCTGACGCATGACCATGATCCTCCTTTGAAACAAGACCTGCAATTACAGTCCATGATTCTGAGTCCTCTCCAAGAAATGTCAAATGTCAGTTTTTCAGACATTCGCTACAAGCAATTAGAATGTGTTCTTCAGATTCTTCACTCTACCGGGCAAAACCTTGGTCAAGGATGGCTCTGTGTGCTAGGAGTAATCGGTGCTGCTACCAATCAACAAGGCGAGGGTCTAATTCGCGTGGCATTCCAAAGCTTACAGCTTGTGGTGACGGATTTCCTTCCCTTGATGCCTTGCACGTGTATCAAGGTCGTGGTTGACGTGGCGGGAAAATTTGGCCTGCAGCCACAAGAGCTGAACATTAGCTTGACAGCCATTGGTCTGTTGTGGAATATATCTGATTTTCTTTCGCAACACCGTGACACGATTCGCACCGAGCTAGAAAAAGCTGAGAGTGCCGCGACTGACAATACCAAGTATGACAGACCAGTTCCCCCATCAGACCGACAGTGGATGTGCCTGTACTCCAAACTTGGCGAGCTGTGCGTTGATCCTCGGCCACCAGTCAGGAAAAGCGCGGGACAGACGCTGTTCTCGACTATTAGTGCGCATGGCTCGTTACTGGAGAATGTCACGTGGTACACAGTCCTTTGGCGGGTGCTGTTTCCGTTACTGGAGCAAGTCAAGACAATGTCCACCTCAGCAGCTGATGTCCCGCCACCAAGCGACGCCGTCAACTCAAAGGGTAAAATCCTCATTCACCATTCACGTGATACAGCTGAAAAACAATGGGCGGAAACACGTGTTCTGACCTTGAGCGGCGTGGCGCGCGTGTTCAACAACCGGCGCCAAATTTTGGCGGGTCTTGATGAGTTCCCGCGCGCGTGGGCGCTTCTTTTGGAGTTTGTCGAGTCTGCAGCGCTGAGCAAGTCCGCTGAAGTCGCACTGGCGGCTCTTAAAAGCTTTCAGGATATCGTTCAAGATTCGAGTGAAAGTCAGGAGAGTGCTGGCGCAAATTCCAGCCCAGGAGAAACCGGAAGAGAGAAAAAAGCAGCTAAAACTGCTGCTAGACTTAAAGTAAAGCCTAAATTTTGCCAGGCAGCGGACGAAGATTTAAATCTATGGACGAATGCTTGGCGTGTGTGGTATAACATCGGTACAACAAGTATGTCCGAGGCACACATTGTCAGAACAAGACGAGATTCCTCAGGCAAACTCATCACAACTAGAACTTACCCTGCACAGGCGTTTCTTGCAGCCCTGGTGCAAATTTTTCCTTCTCTTTTCATGAGAATATACGGCCGTTTTGGCTTAGCAGATTTGCAGAAACTTGTCAGAATTCTACAAACTTCTGTCACAATTCCTGTACCGGTAGATCAATCACCGTTTTTAGTACCATCATTCCAGGATACTGTGCTAACACCCTTACAACACGCTATTTTGGACGCTATTGAGATTCTACGCGAGCCTCTTCCGAATTCCTCCGGGTCAGTCCTTCACGTCTCTAAACAACCAATGTACCCTACACTATTTTCGCTGCTTCTTCAGTTCTTTGATTGTGCTACAGAGCCTCCACGCGTTGATGAGCTATCTGATGGAGATAGCGCTTCTAGACGGAAAAAGAAAGAATGGATTATTCTGTCGCTTACTCCTTTCTCGGAGAAATGTCTGGAGATGGTTATGGCGTTGTATAATGAGTGTTTCTCACAGCCAGCCGTGATGGAAGAGAAAGTGTTGGAGAAAATCATTAAGTCCCTGCGCAATCCTCTTCGCCTCAAGTACAGTTGCTCGTCCCAGTCCACCTGGAAGCTAGCTGTGGATTCGTTGATGACTGTTATTCGCAAAGGACTCACTGTGGCCCTCGCACGCCCAGATTCCTTTAGATCAATGTGGTACGAATTAGCGTCGGCGCTGGAGGACTTCCTCTTCTCAGATATGAGTCCCCCAGAGAACCAGTCTCTTGAACAGCATCAAGCGGATGAAGAACTGGACATCAAGCTTTTGCGCATGATCCGTGAAGAGATTCTGCCCCATTCCGCTGCTCTTCCAAAAGACTTCATGGCGCGGGTCATGGCGCTACTGAACCGAGGCTCAATACACTCAGCTGCAGATGCCACCTTCAGTGGAACGGATGCCAACGGATTTCCTCTTCGTGAAGAGTTTGCCAAGTCATGTTTTGAAACTCTGTTACAGTTTTCATTTGTAAATGGCACACCAGAAGTGGATCAACGCGTAGAACAACCTGACGGTAAAGTATCTGAGTTAGCGCTGGATGCTCTTCTTAGAAGATGTAGTGACGTGCTGGTCAAGTACGTCGAGGACGAAAAACTTAGTGGAAAATGTCCTTTACCAAGAACCCGTATGGCTGAGATGTCTTTTGTTATGAAAGCTATCAGTACATTACTGTCTTCCTTAAAAAGAGCTGTTCAAGAAAATCCTACAGTTGTGGACGGAAAGATCTGGGAACAAGTGGTTGAGTTGTACCCTCGTCTTGTGGAATGTTCCGTATGTAACTCCACCCCTGTCCGACGAGCCTTGCGGGAAGCGTTACAAGAGTACGCTGACCTTATCAAACCGCCGATTCATCCATCTGCCGTGAATGGTAAACGATAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6GP04	Protein MON2 homolog OS=Xenopus laevis OX=8355 GN=mon2 PE=2 SV=1
Q80TL7	Protein MON2 homolog OS=Mus musculus OX=10090 GN=Mon2 PE=1 SV=2
Q7Z3U7	Protein MON2 homolog OS=Homo sapiens OX=9606 GN=MON2 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004259 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12783 all species →	Sec7-like_HUS	Mon2/Sec7/BIG1-like, HUS domain	Domain	Interproscan
PF16213 all species →	DCB	Mon2/Sec7/BIG1-like, dimerisation and cyclophilin-binding domain	Domain	Interproscan
PF16206 all species →	Mon2_C	C-terminal region of Mon2 protein	Family	Interproscan
PF09324 all species →	Sec7-like_HDS	Mon2/Sec7/BIG1-like, HDS	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032691 all species →	Domain	Mon2/Sec7/BIG1-like, HUS domain	Interproscan
IPR032629 all species →	Domain	Mon2/Sec7/BIG1-like, dimerisation and cyclophilin-binding domain	Interproscan
IPR032817 all species →	Domain	Mon2, C-terminal	Interproscan
IPR015403 all species →	Domain	Mon2/Sec7/BIG1-like, HDS	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10663 all species →	GUANYL-NUCLEOTIDE EXCHANGE FACTOR	Interproscan

Gene Ontology

No Gene Ontology signature was detected for evm.model.Ap10.395. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K26678	MON2; protein MON2	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.