Detailed information of evm.model.Ap10.401 in Astrangia poculata

Genomic Location: Ap10:4221669...4222463
NR annotation: XP_028397964.1, ras-like GTP-binding protein RHO [Dendronephthya gigantea]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9PSX7Rho-related GTP-binding protein RhoC OS=Gallus gallus OX=9031 GN=RHOC PE=1 SV=1
P01122Ras-like GTP-binding protein RHO OS=Aplysia californica OX=6500 GN=RHO PE=2 SV=1
Q6NUX8Rho-related GTP-binding protein RhoA-A OS=Danio rerio OX=7955 GN=rhoaa PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0154917 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00071
all species →
RasRas familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005225
all species →
DomainSmall GTP-binding protein domainInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001806
all species →
FamilySmall GTPaseInterproscan
IPR003578
all species →
FamilySmall GTPase RhoInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24072
all species →
RHO FAMILY GTPASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005525
all species →
Molecular FunctionGTP bindingInterproscan
GO:0003924
all species →
Molecular FunctionGTPase activityInterproscan
GO:0005829
all species →
Cellular ComponentcytosolInterproscan
GO:0007264
all species →
Biological Processsmall GTPase-mediated signal transductionInterproscan
GO:0019901
all species →
Molecular Functionprotein kinase bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap10.401.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP