Genomic Location: Ap10:472532...489411
NR annotation: XP_027057225.1, alpha-aminoadipic semialdehyde synthase, mitochondrial-like isoform X1 [Pocillopora damicornis]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap10.46 |
| Transcript |
| evm.model.Ap10.46 |
| Protein |
| evm.model.Ap10.46 |
| UniProt accession | Description |
|---|---|
| A8E657 | Alpha-aminoadipic semialdehyde synthase, mitochondrial OS=Bos taurus OX=9913 GN=AASS PE=2 SV=1 |
| Q9UDR5 | Alpha-aminoadipic semialdehyde synthase, mitochondrial OS=Homo sapiens OX=9606 GN=AASS PE=1 SV=1 |
| Q99K67 | Alpha-aminoadipic semialdehyde synthase, mitochondrial OS=Mus musculus OX=10090 GN=Aass PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003682 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03435 all species → | Sacchrp_dh_NADP | Saccharopine dehydrogenase NADP binding domain | Family | Interproscan |
| PF05222 all species → | AlaDh_PNT_N | Alanine dehydrogenase/PNT, N-terminal domain | Domain | Interproscan |
| PF16653 all species → | Sacchrp_dh_C | Saccharopine dehydrogenase C-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005097 all species → | Domain | Saccharopine dehydrogenase, NADP binding domain | Interproscan |
| IPR036291 all species → | Homologous_superfamily | NAD(P)-binding domain superfamily | Interproscan |
| IPR007886 all species → | Domain | Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal | Interproscan |
| IPR032095 all species → | Domain | Saccharopine dehydrogenase-like, C-terminal | Interproscan |
| IPR051168 all species → | Family | Alpha-aminoadipic semialdehyde synthase | Interproscan |
| IPR007698 all species → | Domain | Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11133 all species → | SACCHAROPINE DEHYDROGENASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004753 all species → | Molecular Function | saccharopine dehydrogenase activity | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0019878 all species → | Biological Process | lysine biosynthetic process via aminoadipic acid | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K14157 | AASS; alpha-aminoadipic semialdehyde synthase | EC:1.5.1.8 EC:1.5.1.9 | Lysine degradation | ko00310 | deepkoala |
Transcript abundance of evm.model.Ap10.46 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
