Genomic Location: Ap10:4825314...4833314
NR annotation: KAJ7323764.1, Transmembrane protease serine 6 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap10.469 |
| Transcript |
| evm.model.Ap10.469 |
| Protein |
| evm.model.Ap10.469 |
| UniProt accession | Description |
|---|---|
| P14272 | Plasma kallikrein OS=Rattus norvegicus OX=10116 GN=Klkb1 PE=1 SV=1 |
| P26262 | Plasma kallikrein OS=Mus musculus OX=10090 GN=Klkb1 PE=1 SV=2 |
| Q9ES87 | Prostasin OS=Rattus norvegicus OX=10116 GN=Prss8 PE=2 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000120 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01549 all species → | ShK | ShK domain-like | Domain | Interproscan |
| PF00089 all species → | Trypsin | Trypsin | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR033116 all species → | Active_site | Serine proteases, trypsin family, serine active site | Interproscan |
| IPR001314 all species → | Family | Peptidase S1A, chymotrypsin family | Interproscan |
| IPR003582 all species → | Domain | ShKT domain | Interproscan |
| IPR001254 all species → | Domain | Serine proteases, trypsin domain | Interproscan |
| IPR009003 all species → | Homologous_superfamily | Peptidase S1, PA clan | Interproscan |
| IPR018114 all species → | Active_site | Serine proteases, trypsin family, histidine active site | Interproscan |
| IPR043504 all species → | Homologous_superfamily | Peptidase S1, PA clan, chymotrypsin-like fold | Interproscan |
| IPR012224 all species → | Family | Peptidase S1A, coagulation factor VII/IX/X/C/Z | Interproscan |
| IPR050127 all species → | Family | Serine Proteases (Peptidase S1 Family) | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24264 all species → | TRYPSIN-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004252 all species → | Molecular Function | serine-type endopeptidase activity | Interproscan |
| GO:0006508 all species → | Biological Process | proteolysis | Interproscan |
| GO:0005509 all species → | Molecular Function | calcium ion binding | Interproscan |
| GO:0007596 all species → | Biological Process | blood coagulation | Interproscan |
| GO:0005615 all species → | Cellular Component | extracellular space | Interproscan |
evm.model.Ap10.469.Transcript abundance of evm.model.Ap10.469 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
