Detailed information of evm.model.Ap10.483 in Astrangia poculata

Genomic Location: Ap10:4944901...4947248
NR annotation: KAJ7379383.1, hypothetical protein OS493_016620 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6P3V7Tetratricopeptide repeat protein 41 OS=Rattus norvegicus OX=10116 GN=Ttc41 PE=2 SV=2
Q692V3Tetratricopeptide repeat protein 41 OS=Mus musculus OX=10090 GN=Ttc41 PE=1 SV=1
Q6P2S7Putative tetratricopeptide repeat protein 41 OS=Homo sapiens OX=9606 GN=TTC41P PE=5 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009454 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13271
all species →		DUF4062Domain of unknown function (DUF4062)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051191
all species →		FamilyDDB1-CUL4-associated factor 12Interproscan
IPR025139
all species →		DomainDomain of unknown function DUF4062Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19860
all species →		DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0080008
all species →		Cellular ComponentCul4-RING E3 ubiquitin ligase complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap10.483.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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