Gene detail

Detailed information of evm.model.Ap10.493 in Astrangia poculata

Genomic Location: Ap10:5070807...5075179
NR annotation: CAH3112320.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9D8P7	General transcription factor 3C polypeptide 6 OS=Mus musculus OX=10090 GN=Gtf3c6 PE=2 SV=1
Q969F1	General transcription factor 3C polypeptide 6 OS=Homo sapiens OX=9606 GN=GTF3C6 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008053 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10419 all species →	TFIIIC_sub6	TFIIIC subunit triple barrel domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042771 all species →	Family	TFIIIC subunit GTF3C6-like	Interproscan
IPR019481 all species →	Domain	Transcription factor TFIIIC, triple barrel domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21860 all species →	TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 6-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000127 all species →	Cellular Component	transcription factor TFIIIC complex	Interproscan
GO:0006383 all species →	Biological Process	transcription by RNA polymerase III	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15203	GTF3C6; general transcription factor 3C polypeptide 6	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.