Gene detail

Detailed information of evm.model.Ap10.517 in Astrangia poculata

Genomic Location: Ap10:5349601...5364634
NR annotation: XP_027038600.1, uncharacterized protein LOC113667008 isoform X1 [Pocillopora damicornis]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap10.517

atgcctaaactgcttggtaactggcgacatgatagccaagctgttcagaagtgcgctctggccgcaaagaaggctgggtactccgtttttggagtgcagaacgctggagagtgctggtcaggaccgcaggctcacctgacgtacaaaaagtacggaagctcgacgagatgtgtaaatggaacaggtggatcatgggcacaagatgtatacgagattgtcaatgcatcactgattccaaactacgatattaaaagatgttacgaagtcgacatcacatttcactatcagatcgctggtggcctcaaaagtaacaccatacaaagtgccaaattgaagttttccaactattttattgatatatccagacttgttgcaactgtttcacaatgcaaggacgtaatcactgccaggggagatatatcggcctctccgccgggtgtggacagtgttttctttaaagtgcctcttatttttacggcaaaaagtgatgtaactgatgatcaagtctccacaaagctcacaaactgtataaacaaagcgcaaacttacaaggcatttatagacaacaacactccacaaataactgaaagtggtgtcccttacaaaaaatacaattcatctactatatccgacaaacgatcctgttgcggtggagacataccgccgccttgttgtgccgcgggctcaatcaaggtttccagcacgaaatgtgatacacctttttctcgtgcaaaggccccaccagctaagaagggacaggcggctcttgggacgagaatggcgggaagaaaccttcaatatgctgtcaccccctacggttgtgtgcctggttttcatttcgttcccagtagtttttgtgtgcgttgtcctttggacacataccaggaaaaacaaggtcaaaagaattgtaagaattgtccaggaaagaaacagacattcggtaaaacagggatggcaagcaagtccaactgctcagacacaaatcctctacagctccgtgacctgacggcttacctaccgtatggtatcaagccagaaactgttgtcaagaatgttaccgttacagggaaactggcttcccttgttcaacctttcatattttacatcgacaatgtcgtcagaccaggacaacggtcacgcggcagcctaaagcgacgacggcgtgacattgctgacgtgtgcgaagaggcgggcacatatgagccactgaattatttctgcattcatcgtaagagtgggcaattaaaagtaacgcaagactttgtgtttaaggatggcgaggaatttgatctgaaaattcgcgtgacagacagcgaccagtggggaaaaactgaaaacatggcaaattttaaatttatttcacgcgacgattgcaaagatatcaggacaacttataacgaagctgtaaagttttgtaaaaagtatgattctccagagcccgcacgggccagtagcgacccatcgtgcccaagtgcacagtgcttaaaacctttgtataactggcaggagtcgcttaatgcaagtgagaaattgaaagcggactgctcctttgatcctgagaatatggcagctgtgatgcagaagtactcgagttgtattggtccagcgaacgttaccttaaacccagtctcccagacgttaaagaaggacgctccagccgtattgacatgcaacgcgtccagtccactacaagtaaagatcacgtggtttaagaacggaaagtcaatggaacgatatggaagtcaattgaagattgacagctttcaatatgaggatcaaggcgattataaatgtagcttctcgacatatttgacaagcagtcaatctaaaccggctttacttgttttagaagatgtcttcacgtcaagagtgtcatttcgtattgtgaataaaaaattcaacgacgacttgttggatccaagcagcgatagctactcggacatgcagatacaaatccagagaaatctggaaaactatctcaatagtggaaatccagattggagttatgaagtcaaacttgttcaattcagggactcgtccgggaaggtgggcgtggacgtggtaatttacagcccagccaagagtgaagagctcacttcctactacaacagactcaaaaccttattggctgatgagagtgccatgggtaacacactgaagcctttgaaggtgtcacgcaagagcgtgaccgtgaggagtgcaactcactgcctgccagaaagtactgggaaagtatccataatgggagtatttgattggaagttaactgtgattggtcagacgtcgcctcctgtgaaatgcccgtatggtccgcctgctgccactgcgacgcgtccctgtggcgggaatttctggactggtggtttgtggaaggacccggatgcaagcagctgcaagtacaaatccaagagaacaaatcaacttaacaatcttgtaaagactccaattggcaagcaaaacgttgtcaaggtgacgaaagaagtgaaaaatctgacgtcagaccctgatgacatgaacgaggctgacgcggtgctgattgctgacgtcatagaaaatgtcgtcttattggatgattcgttgaatgagactgcccaagatgttgtggacgttattgacaatgtaatgaaaatgaagacgaaggatatacaagagagtcaacgatcaaacaaagcttctaccaaatttcttctagcgctggacagagtagccacaaaacttcccctggcgcctaacaaatcctccaggcgtcttgttgctccaagtttagcgatccaatcaaaccgcgtggacccaggctcttttacgggcatgtcacttgctatcaaaccacctgccgctgacccagacaaattaacacgcgatagcatggttaatgacgaacttccgatggctgatgttcaaacgtcaatcaccttaccggaagtcatgtttgagaagaacactcctgcagtaaacgcggtgaagattggctttgtgatttaccagaatgacaagtttttccagccggttatcccggacgacgaagaaagtgaacaaaaggcgccttcaattatgagtcgagtaatttcaagcagcgtgcaagatatgacgtttgagaaccttactattcctgttgaacttgtttttgagcccgcagttaaagtagaaatggacagcgcagagtttgtgtgtgtattttgggacttcagtgctatgggcggcctgggaaactggtcagatcgaggctgcaggcaaatgaagaatgaggcaggccgggtacaatgccactgtgatcacatgactaactttgcagtgctgttctctgctggtggaccgaagacgcatggcgacaatgacaataaacacgccatggcgctgtcaatcatttcttacgtgggttgtgcgatttcattggttgggctaacactaacattgatgacgtatgcgctgttcaggaatttacgcaagaccaaccagcagccaatcctgatgagcctgtgcgtggcgctcatgttactgctgatcgtattcatcgcgggagcagcccgaacagagaatcctattggttgtcgcattgttgcggttctgcttcactactttgccttagcgaccgtgatgtggatgggagtagagggttataacatgtatatgtcctttgtacaagtgatggccacctatcaatcaaaattcatgctgaaggcatctgcggtggcctggggcgtgccgggtgtcattgtgatcatcactattgcctcggcaacgagttactatggcaacgaggacgtctgtgtactctatggagttcccttccaagccgcccagtttgctcccattctcttaataatcctcatcaactttgtcatttttatcctggctttacgcacaatcaatcgcactggcgctatggtatcagcggagaaaaaatccacgcagtaccaccgagcgcgcaccgcattcgccattttgcttctcttgggactcacgtgggcgttcggagccctggctgtgtcacgtgctcagctcgtgttcgactacttgttctgcatattcaactcgcttcaaggatttttgatcttctacttccactgcataagacaccaagaagttcgtaatctgtggaagggattgctgattggcaaagggttgagggtccacaagacggaaaccgcttctcgaaccggatatcccaaaacggcttcaagaagaaacaaatatgagcctggtacaccgtcgacatcactgtcaatgcagactccacccaggagaaaagagacagttagttctgttgttggaagccattctccgacgttgaagtcccgtcctgatgtagttcccgctgaggtctga

Transcript

evm.model.Ap10.517

ATGCCTAAACTGCTTGGTAACTGGCGACATGATAGCCAAGCTGTTCAGAAGTGCGCTCTGGCCGCAAAGAAGGCTGGGTACTCCGTTTTTGGAGTGCAGAACGCTGGAGAGTGCTGGTCAGGACCGCAGGCTCACCTGACGTACAAAAAGTACGGAAGCTCGACGAGATGTGTAAATGGAACAGGTGGATCATGGGCACAAGATGTATACGAGATTGTCAATGCATCACTGATTCCAAACTACGATATTAAAAGATGTTACGAAGTCGACATCACATTTCACTATCAGATCGCTGGTGGCCTCAAAAGTAACACCATACAAAGTGCCAAATTGAAGTTTTCCAACTATTTTATTGATATATCCAGACTTGTTGCAACTGTTTCACAATGCAAGGACGTAATCACTGCCAGGGGAGATATATCGGCCTCTCCGCCGGGTGTGGACAGTGTTTTCTTTAAAGTGCCTCTTATTTTTACGGCAAAAAGTGATGTAACTGATGATCAAGTCTCCACAAAGCTCACAAACTGTATAAACAAAGCGCAAACTTACAAGGCATTTATAGACAACAACACTCCACAAATAACTGAAAGTGGTGTCCCTTACAAAAAATACAATTCATCTACTATATCCGACAAACGATCCTGTTGCGGTGGAGACATACCGCCGCCTTGTTGTGCCGCGGGCTCAATCAAGGTTTCCAGCACGAAATGTGATACACCTTTTTCTCGTGCAAAGGCCCCACCAGCTAAGAAGGGACAGGCGGCTCTTGGGACGAGAATGGCGGGAAGAAACCTTCAATATGCTGTCACCCCCTACGGTTGTGTGCCTGGTTTTCATTTCGTTCCCAGTAGTTTTTGTGTGCGTTGTCCTTTGGACACATACCAGGAAAAACAAGGTCAAAAGAATTGTAAGAATTGTCCAGGAAAGAAACAGACATTCGGTAAAACAGGGATGGCAAGCAAGTCCAACTGCTCAGACACAAATCCTCTACAGCTCCGTGACCTGACGGCTTACCTACCGTATGGTATCAAGCCAGAAACTGTTGTCAAGAATGTTACCGTTACAGGGAAACTGGCTTCCCTTGTTCAACCTTTCATATTTTACATCGACAATGTCGTCAGACCAGGACAACGGTCACGCGGCAGCCTAAAGCGACGACGGCGTGACATTGCTGACGTGTGCGAAGAGGCGGGCACATATGAGCCACTGAATTATTTCTGCATTCATCGTAAGAGTGGGCAATTAAAAGTAACGCAAGACTTTGTGTTTAAGGATGGCGAGGAATTTGATCTGAAAATTCGCGTGACAGACAGCGACCAGTGGGGAAAAACTGAAAACATGGCAAATTTTAAATTTATTTCACGCGACGATTGCAAAGATATCAGGACAACTTATAACGAAGCTGTAAAGTTTTGTAAAAAGTATGATTCTCCAGAGCCCGCACGGGCCAGTAGCGACCCATCGTGCCCAAGTGCACAGTGCTTAAAACCTTTGTATAACTGGCAGGAGTCGCTTAATGCAAGTGAGAAATTGAAAGCGGACTGCTCCTTTGATCCTGAGAATATGGCAGCTGTGATGCAGAAGTACTCGAGTTGTATTGGTCCAGCGAACGTTACCTTAAACCCAGTCTCCCAGACGTTAAAGAAGGACGCTCCAGCCGTATTGACATGCAACGCGTCCAGTCCACTACAAGTAAAGATCACGTGGTTTAAGAACGGAAAGTCAATGGAACGATATGGAAGTCAATTGAAGATTGACAGCTTTCAATATGAGGATCAAGGCGATTATAAATGTAGCTTCTCGACATATTTGACAAGCAGTCAATCTAAACCGGCTTTACTTGTTTTAGAAGATGTCTTCACGTCAAGAGTGTCATTTCGTATTGTGAATAAAAAATTCAACGACGACTTGTTGGATCCAAGCAGCGATAGCTACTCGGACATGCAGATACAAATCCAGAGAAATCTGGAAAACTATCTCAATAGTGGAAATCCAGATTGGAGTTATGAAGTCAAACTTGTTCAATTCAGGGACTCGTCCGGGAAGGTGGGCGTGGACGTGGTAATTTACAGCCCAGCCAAGAGTGAAGAGCTCACTTCCTACTACAACAGACTCAAAACCTTATTGGCTGATGAGAGTGCCATGGGTAACACACTGAAGCCTTTGAAGGTGTCACGCAAGAGCGTGACCGTGAGGAGTGCAACTCACTGCCTGCCAGAAAGTACTGGGAAAGTATCCATAATGGGAGTATTTGATTGGAAGTTAACTGTGATTGGTCAGACGTCGCCTCCTGTGAAATGCCCGTATGGTCCGCCTGCTGCCACTGCGACGCGTCCCTGTGGCGGGAATTTCTGGACTGGTGGTTTGTGGAAGGACCCGGATGCAAGCAGCTGCAAGTACAAATCCAAGAGAACAAATCAACTTAACAATCTTGTAAAGACTCCAATTGGCAAGCAAAACGTTGTCAAGGTGACGAAAGAAGTGAAAAATCTGACGTCAGACCCTGATGACATGAACGAGGCTGACGCGGTGCTGATTGCTGACGTCATAGAAAATGTCGTCTTATTGGATGATTCGTTGAATGAGACTGCCCAAGATGTTGTGGACGTTATTGACAATGTAATGAAAATGAAGACGAAGGATATACAAGAGAGTCAACGATCAAACAAAGCTTCTACCAAATTTCTTCTAGCGCTGGACAGAGTAGCCACAAAACTTCCCCTGGCGCCTAACAAATCCTCCAGGCGTCTTGTTGCTCCAAGTTTAGCGATCCAATCAAACCGCGTGGACCCAGGCTCTTTTACGGGCATGTCACTTGCTATCAAACCACCTGCCGCTGACCCAGACAAATTAACACGCGATAGCATGGTTAATGACGAACTTCCGATGGCTGATGTTCAAACGTCAATCACCTTACCGGAAGTCATGTTTGAGAAGAACACTCCTGCAGTAAACGCGGTGAAGATTGGCTTTGTGATTTACCAGAATGACAAGTTTTTCCAGCCGGTTATCCCGGACGACGAAGAAAGTGAACAAAAGGCGCCTTCAATTATGAGTCGAGTAATTTCAAGCAGCGTGCAAGATATGACGTTTGAGAACCTTACTATTCCTGTTGAACTTGTTTTTGAGCCCGCAGTTAAAGTAGAAATGGACAGCGCAGAGTTTGTGTGTGTATTTTGGGACTTCAGTGCTATGGGCGGCCTGGGAAACTGGTCAGATCGAGGCTGCAGGCAAATGAAGAATGAGGCAGGCCGGGTACAATGCCACTGTGATCACATGACTAACTTTGCAGTGCTGTTCTCTGCTGGTGGACCGAAGACGCATGGCGACAATGACAATAAACACGCCATGGCGCTGTCAATCATTTCTTACGTGGGTTGTGCGATTTCATTGGTTGGGCTAACACTAACATTGATGACGTATGCGCTGTTCAGGAATTTACGCAAGACCAACCAGCAGCCAATCCTGATGAGCCTGTGCGTGGCGCTCATGTTACTGCTGATCGTATTCATCGCGGGAGCAGCCCGAACAGAGAATCCTATTGGTTGTCGCATTGTTGCGGTTCTGCTTCACTACTTTGCCTTAGCGACCGTGATGTGGATGGGAGTAGAGGGTTATAACATGTATATGTCCTTTGTACAAGTGATGGCCACCTATCAATCAAAATTCATGCTGAAGGCATCTGCGGTGGCCTGGGGCGTGCCGGGTGTCATTGTGATCATCACTATTGCCTCGGCAACGAGTTACTATGGCAACGAGGACGTCTGTGTACTCTATGGAGTTCCCTTCCAAGCCGCCCAGTTTGCTCCCATTCTCTTAATAATCCTCATCAACTTTGTCATTTTTATCCTGGCTTTACGCACAATCAATCGCACTGGCGCTATGGTATCAGCGGAGAAAAAATCCACGCAGTACCACCGAGCGCGCACCGCATTCGCCATTTTGCTTCTCTTGGGACTCACGTGGGCGTTCGGAGCCCTGGCTGTGTCACGTGCTCAGCTCGTGTTCGACTACTTGTTCTGCATATTCAACTCGCTTCAAGGATTTTTGATCTTCTACTTCCACTGCATAAGACACCAAGAAGTTCGTAATCTGTGGAAGGGATTGCTGATTGGCAAAGGGTTGAGGGTCCACAAGACGGAAACCGCTTCTCGAACCGGATATCCCAAAACGGCTTCAAGAAGAAACAAATATGAGCCTGGTACACCGTCGACATCACTGTCAATGCAGACTCCACCCAGGAGAAAAGAGACAGTTAGTTCTGTTGTTGGAAGCCATTCTCCGACGTTGAAGTCCCGTCCTGATGTAGTTCCCGCTGAGGTCTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8IZF6	Adhesion G-protein coupled receptor G4 OS=Homo sapiens OX=9606 GN=ADGRG4 PE=1 SV=2
Q8CJ11	Adhesion G-protein coupled receptor G2 OS=Rattus norvegicus OX=10116 GN=Adgrg2 PE=1 SV=1
Q8IZP9	Adhesion G-protein coupled receptor G2 OS=Homo sapiens OX=9606 GN=ADGRG2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000570 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00002 all species →	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan
PF01390 all species →	SEA	SEA domain	Family	Interproscan
PF07699 all species →	Ephrin_rec_like	Tyrosine-protein kinase ephrin type A/B receptor-like	Domain	Interproscan
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF01825 all species →	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR000832 all species →	Family	GPCR, family 2, secretin-like	Interproscan
IPR036364 all species →	Homologous_superfamily	SEA domain superfamily	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR000082 all species →	Domain	SEA domain	Interproscan
IPR011641 all species →	Domain	Tyrosine-protein kinase ephrin type A/B receptor-like	Interproscan
IPR000203 all species →	Conserved_site	GPS motif	Interproscan
IPR017981 all species →	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR046338 all species →	Homologous_superfamily	GAIN domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45692 all species →	G_PROTEIN_RECEP_F2_4 DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0004888 all species →	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0007166 all species →	Biological Process	cell surface receptor signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap10.517.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.