Detailed information of evm.model.Ap10.609 in Astrangia poculata

Genomic Location: Ap10:6180329...6191599
NR annotation: KAJ7370281.1, hypothetical protein OS493_033361 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O60870DNA/RNA-binding protein KIN17 OS=Homo sapiens OX=9606 GN=KIN PE=1 SV=2
Q8K339DNA/RNA-binding protein KIN17 OS=Mus musculus OX=10090 GN=Kin PE=1 SV=1
Q9ZVU5KIN17-like protein OS=Arabidopsis thaliana OX=3702 GN=KIN17 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003918 (this species only)

 Pfam domain
No Pfam domain signature was detected for evm.model.Ap10.609. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR019447
all species →		DomainDNA/RNA-binding protein Kin17, WH-like domainInterproscan
IPR036236
all species →		Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR037321
all species →		FamilyKIN17-like proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12805
all species →		KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003690
all species →		Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006260
all species →		Biological ProcessDNA replicationInterproscan
GO:0006974
all species →		Biological ProcessDNA damage responseInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K13102KIN; DNA/RNA-binding protein KIN17-Messenger RNA biogenesisko03019deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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