Genomic Location: Ap10:6592728...6607051
NR annotation: RMX58704.1, hypothetical protein pdam_00009503 [Pocillopora damicornis]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap10.634 |
| Transcript |
| evm.model.Ap10.634 |
| Protein |
| evm.model.Ap10.634 |
| UniProt accession | Description |
|---|---|
| Q7TN88 | Polycystin-1-like protein 2 OS=Mus musculus OX=10090 GN=Pkd1l2 PE=2 SV=1 |
| Q7Z443 | Polycystin-1-like protein 3 OS=Homo sapiens OX=9606 GN=PKD1L3 PE=1 SV=1 |
| Q7Z442 | Polycystin-1-like protein 2 OS=Homo sapiens OX=9606 GN=PKD1L2 PE=1 SV=5 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000040 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08016 all species → | PKD_channel | Polycystin cation channel | Family | Interproscan |
| PF20519 all species → | Polycystin_dom | Polycystin domain | Domain | Interproscan |
| PF01825 all species → | GPS | GPCR proteolysis site, GPS, motif | Motif | Interproscan |
| PF01477 all species → | PLAT | PLAT/LH2 domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001024 all species → | Domain | PLAT/LH2 domain | Interproscan |
| IPR000203 all species → | Conserved_site | GPS motif | Interproscan |
| IPR046338 all species → | Homologous_superfamily | GAIN domain superfamily | Interproscan |
| IPR036392 all species → | Homologous_superfamily | PLAT/LH2 domain superfamily | Interproscan |
| IPR051223 all species → | Family | Polycystin | Interproscan |
| IPR013122 all species → | Domain | Polycystin cation channel, PKD1/PKD2 | Interproscan |
| IPR000434 all species → | Family | Polycystic kidney disease type 1 protein | Interproscan |
| IPR046791 all species → | Domain | Polycystin domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10877 all species → | POLYCYSTIN FAMILY MEMBER | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0005262 all species → | Molecular Function | calcium channel activity | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0050982 all species → | Biological Process | detection of mechanical stimulus | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K04988 | PKD1L2; polycystin 1L2 | - | Ion channels | ko04040 | deepkoala |
