Detailed information of evm.model.Ap10.644 in Astrangia poculata

Genomic Location: Ap10:6765564...6769553
NR annotation: KAJ7336063.1, hypothetical protein OS493_013440 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9UBN7Protein deacetylase HDAC6 OS=Homo sapiens OX=9606 GN=HDAC6 PE=1 SV=2
Q9Z2V5Protein deacetylase HDAC6 OS=Mus musculus OX=10090 GN=Hdac6 PE=1 SV=3
A0A8I6GM68Protein deacetylase HDAC6 OS=Rattus norvegicus OX=10116 GN=Hdac6 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010167 (this species only)
Ubiquitin familyUBD|ZnF|ZnF_UBP · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02148
all species →		zf-UBPZn-finger in ubiquitin-hydrolases and other proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001607
all species →		DomainZinc finger, UBP-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47665
all species →		HISTONE DEACETYLASE-LIKE PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap10.644.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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