Detailed information of evm.model.Ap10.781 in Astrangia poculata

Genomic Location: Ap10:8393954...8415457
NR annotation: CAH3111817.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5EA28CXXC-type zinc finger protein 1 OS=Bos taurus OX=9913 GN=CXXC1 PE=2 SV=1
Q9CWW7CXXC-type zinc finger protein 1 OS=Mus musculus OX=10090 GN=Cxxc1 PE=1 SV=1
Q9P0U4CXXC-type zinc finger protein 1 OS=Homo sapiens OX=9606 GN=CXXC1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002227 (this species only)
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628
all species →		PHDPHD-fingerDomainInterproscan
PF02008
all species →		zf-CXXCCXXC zinc finger domainDomainInterproscan
PF12269
all species →		CpG_bind_CCpG binding protein C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019786
all species →		Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR002857
all species →		DomainZinc finger, CXXC-typeInterproscan
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR001965
all species →		DomainZinc finger, PHD-typeInterproscan
IPR019787
all species →		DomainZinc finger, PHD-fingerInterproscan
IPR037869
all species →		FamilySpp1/CFP1Interproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR022056
all species →		DomainCpG binding protein, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46174
all species →		CXXC-TYPE ZINC FINGER PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0048188
all species →		Cellular ComponentSet1C/COMPASS complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14960CXXC1, SPP1, CPS40; COMPASS component SPP1-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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