Detailed information of evm.model.Ap10.786 in Astrangia poculata

Genomic Location: Ap10:8476325...8494380
NR annotation: XP_020607157.1, 39S ribosomal protein L46, mitochondrial-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9H2W6Large ribosomal subunit protein mL46 OS=Homo sapiens OX=9606 GN=MRPL46 PE=1 SV=1
Q5RBU2Large ribosomal subunit protein mL46 OS=Pongo abelii OX=9601 GN=MRPL46 PE=2 SV=1
P36528Large ribosomal subunit protein mL46 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRPL17 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003482 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11788
all species →		MRP-L4639S mitochondrial ribosomal protein L46 FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040008
all species →		FamilyLarge ribosomal subunit protein mL46Interproscan
IPR015797
all species →		Homologous_superfamilyNUDIX hydrolase-like domain superfamilyInterproscan
IPR021757
all species →		DomainLarge ribosomal subunit protein mL46, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13124
all species →		39S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005762
all species →		Cellular Componentmitochondrial large ribosomal subunitInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap10.786.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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