Gene detail

Detailed information of evm.model.Ap10.81 in Astrangia poculata

Genomic Location: Ap10:952603...957770
NR annotation: XP_020611187.1, ras-related protein Rap-1b isoform X1 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P62833	Ras-related protein Rap-1A OS=Bos taurus OX=9913 GN=RAP1A PE=1 SV=1
P62834	Ras-related protein Rap-1A OS=Homo sapiens OX=9606 GN=RAP1A PE=1 SV=1
P62835	Ras-related protein Rap-1A OS=Mus musculus OX=10090 GN=Rap1a PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000339 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071 all species →	Ras	Ras family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR005225 all species →	Domain	Small GTP-binding protein domain	Interproscan
IPR001806 all species →	Family	Small GTPase	Interproscan
IPR020849 all species →	Family	Small GTPase, Ras-type	Interproscan
IPR038851 all species →	Family	Ras-related protein Rap1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24070 all species →	RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0019003 all species →	Molecular Function	GDP binding	Interproscan
GO:0032486 all species →	Biological Process	Rap protein signal transduction	Interproscan
GO:0071320 all species →	Biological Process	cellular response to cAMP	Interproscan
GO:2000301 all species →	Biological Process	negative regulation of synaptic vesicle exocytosis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04353	RAP1A; Ras-related protein Rap-1A	-	GTP-binding proteins	ko04031	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.