Gene detail

Detailed information of evm.model.Ap10.871 in Astrangia poculata

Genomic Location: Ap10:9337527...9338890
NR annotation: KAJ7360027.1, EF-hand calcium-binding domain-containing protein 9 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9DAM2	EF-hand calcium-binding domain-containing protein 9 OS=Mus musculus OX=10090 GN=Efcab9 PE=1 SV=2
A8MZ26	EF-hand calcium-binding domain-containing protein 9 OS=Homo sapiens OX=9606 GN=EFCAB9 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009358 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13499 all species →	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF12763 all species →	EF-hand_4	Cytoskeletal-regulatory complex EF hand	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR000261 all species →	Domain	EH domain	Interproscan
IPR042798 all species →	Family	EF-hand calcium-binding domain-containing protein 9	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47065 all species →	EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 9	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0061891 all species →	Molecular Function	calcium ion sensor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap10.871.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.