Detailed information of evm.model.Ap11.1096 in Astrangia poculata

Genomic Location: Ap11:12264820...12271927
NR annotation: XP_020607171.1, deoxyribodipyrimidine photo-lyase-like isoform X1 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q28811Deoxyribodipyrimidine photo-lyase OS=Potorous tridactylus OX=9310 GN=PHR PE=2 SV=1
P34205Deoxyribodipyrimidine photo-lyase OS=Carassius auratus OX=7957 GN=phr PE=2 SV=1
Q9SB00Deoxyribodipyrimidine photo-lyase OS=Arabidopsis thaliana OX=3702 GN=PHR1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007888 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00875
all species →		DNA_photolyaseDNA photolyaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006050
all species →		DomainDNA photolyase, N-terminalInterproscan
IPR036155
all species →		Homologous_superfamilyCryptochrome/photolyase, N-terminal domain superfamilyInterproscan
IPR052219
all species →		FamilyDNA Photolyase Class-2Interproscan
IPR032673
all species →		Conserved_siteDNA photolyase class 2, conserved siteInterproscan
IPR008148
all species →		FamilyDNA photolyase class 2Interproscan
IPR014729
all species →		Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR036134
all species →		Homologous_superfamilyCryptochrome/DNA photolyase, FAD-binding domain-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10211
all species →		DEOXYRIBODIPYRIMIDINE PHOTOLYASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000719
all species →		Biological Processphotoreactive repairInterproscan
GO:0003904
all species →		Molecular Functiondeoxyribodipyrimidine photo-lyase activityInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01669phr, PHR1; deoxyribodipyrimidine photo-lyaseEC:4.1.99.3
DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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