Gene detail

Detailed information of evm.model.Ap11.1102 in Astrangia poculata

Genomic Location: Ap11:12324130...12331278
NR annotation: XP_020607257.1, non-syndromic hearing impairment protein 5 homolog [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005507 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04598 all species →	Gasdermin	Gasdermin pore forming domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042377 all species →	Family	Gasdermin-E	Interproscan
IPR040460 all species →	Domain	Gasdermin, pore forming domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15207 all species →	NONSYNDROMIC HEARING IMPAIRMENT PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0012501 all species →	Biological Process	programmed cell death	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22147	PJVK, DFNB59; pejvakin	-	General function prediction only	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.