Detailed information of evm.model.Ap11.1188 in Astrangia poculata

Genomic Location: Ap11:13241250...13241870
NR annotation: XP_020605795.1, transmembrane emp24 domain-containing protein 7-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q78IS1Transmembrane emp24 domain-containing protein 3 OS=Mus musculus OX=10090 GN=Tmed3 PE=1 SV=1
Q6AY25Transmembrane emp24 domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Tmed3 PE=1 SV=1
Q9Y3Q3Transmembrane emp24 domain-containing protein 3 OS=Homo sapiens OX=9606 GN=TMED3 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001437 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01105
all species →		EMP24_GP25Lemp24/gp25L/p24 family/GOLDDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009038
all species →		DomainGOLD domainInterproscan
IPR015720
all species →		FamilyTransmembrane emp24 domain-containing proteinInterproscan
IPR036598
all species →		Homologous_superfamilyGOLD domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22811
all species →		TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan
GO:0005793
all species →		Cellular Componentendoplasmic reticulum-Golgi intermediate compartmentInterproscan
GO:0005794
all species →		Cellular ComponentGolgi apparatusInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0006888
all species →		Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0007030
all species →		Biological ProcessGolgi organizationInterproscan
GO:0030134
all species →		Cellular ComponentCOPII-coated ER to Golgi transport vesicleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap11.1188.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP