Gene detail

Detailed information of evm.model.Ap11.1223 in Astrangia poculata

Genomic Location: Ap11:13622599...13646533
NR annotation: XP_022809535.1, putative dual specificity tyrosine-phosphorylation-regulated kinase 3 homolog [Stylophora pistillata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap11.1223

atgaagggcgataaaggaaggagtgtaattgccaaacgaaggaaaggtacagttaatcaagtagagggcgaagtcgatgacgacgacgacagtctcatcgaagacgaaattgtttaccttgatgacaaagccagagtgaagcagggtactggcttctgcagagcaagcatttcccctcctgaaaggtttgttactgcccaactttcagggggactgaaggtactatacaagcacctgggaaataagaagaaagacactcataagcaatatgcatcccaaacaggtacagatggaaagttccagccatgttatccagttcccttgcttgctggaaggtacaaatttgttcaagttattggacaaggccagtcttcaatcctggttgctgcagaggatactttccatcctgataagaagccagttgctgtcaaaattatgcatctggattattcaagacttggagctcaggaggcagactgtattcaaaagctgaacaagtcagatatccttcatgtttccagaactgtccagttgtttaatattttcagttttgagggtcactattgtttggtgtttgagctgttgcgtcccagacctctccatcaatactttcagaaatgtcagtttgataacgaggaggcaaagttaaaagtgatcagaaaaataactttacaactgttacaagctcttggatttcttaaaagagaaaatgttatccatgctgacttgaaaccagagaacattctttttgaagaaggtgaagaaatcaagatcaaagttgttgactttgggaatgcaatacactgggttcacagagaggtttccttgtattatgatgagtttgaactgcaaacgttactctacagagctccagaggtgatgttcggtgttcattttggtcccgaagttgacatgtggtctttaggatgtattttggctgagctgtacattggcaaacctttatttcttggaagaaataaaattgaaataatgcaagaggtgacctcagtctttggtcccatacccaggaatccattccagactggcaagttcttccaagatttgtcagagtttgttggtcacaatccagaagtcaatcagcttgtccttgtggccaacctgatgaagaaacttcacaattcaaggaattatgcctttgcaagtttcttggttggtttgctgcgttacaacccaagtaaacgacttacaccctctcaagctgctatgcatccatttttagctcctgattttctgtatgcttatttgttgccacaggaaggagataaaatctcagatgctgctgcaggttacacagatatattaatcactcctgagcaatatgtctccaagccacacgttgacaaggatatcaaaaggcaacatttttctggaactgaactgcttaagacagggacgaggactgtgctttatagcagtagtaaagcttcgtctcctgtggtaacaagccaaaccgaggagagtgacgtaaataacttttcacaagcaacaattaagaattatggaaaatctcaatggccaaatgaagtgattgtaatggatgagaaatctaacaacgctgatcagttgccagtagaaaattccagatatgcaatggagggccctctcacatcaagcaagcctacaccaactcgcccacagaataaaagatctcctttgaataaagaaaagataaactctggtgatatagtgaagaaggaaagagcaacctctatcaacaacaggtctgctcttccaactaacccaaatcctgtttgtggaagtcaaaacaacaacagtttttcaaaattggacagcacagaacggtccgatctggtggagatttcaccaaggaaaactcgccttcctagctcttacaatgagctggagagatcttcaatgaaattaaaagaccgtcaagctgatacgtcccaacctagtagcactgttacgccaggcgcaagtgctgtaaacaatataaagaatcatcctttgtcagaaaatgttctcgatcttccctcgcggtggaatagcaatgctgtgagtaaaaataaagcagagagtgttgacaggtttcatcataaagcgatttctacgaaaacaagatttgatttagacaagtgttcttccttcgatgagacaaatgttgcagcaaggacacgtgtctataacaggaaaacaaaatacagaaaactagatcaactaaaccatttgtctttaaaaatagaatgtagtaaactcgaggaccctgttaccggccaaaggaaaaaaatggcaaaaaactctagatctcagtcggtgaaaacatccccaatggatcaaagtcgcaactcgagatgtagaaggaaaaagctaagtcaggagcaactggagcaggactcggtaaaagctgcatctcctggcaaataccaagatgatgtagtgatgttgctctga

Transcript

evm.model.Ap11.1223

ATGAAGGGCGATAAAGGAAGGAGTGTAATTGCCAAACGAAGGAAAGGTACAGTTAATCAAGTAGAGGGCGAAGTCGATGACGACGACGACAGTCTCATCGAAGACGAAATTGTTTACCTTGATGACAAAGCCAGAGTGAAGCAGGGTACTGGCTTCTGCAGAGCAAGCATTTCCCCTCCTGAAAGGTTTGTTACTGCCCAACTTTCAGGGGGACTGAAGGTACTATACAAGCACCTGGGAAATAAGAAGAAAGACACTCATAAGCAATATGCATCCCAAACAGGTACAGATGGAAAGTTCCAGCCATGTTATCCAGTTCCCTTGCTTGCTGGAAGGTACAAATTTGTTCAAGTTATTGGACAAGGCCAGTCTTCAATCCTGGTTGCTGCAGAGGATACTTTCCATCCTGATAAGAAGCCAGTTGCTGTCAAAATTATGCATCTGGATTATTCAAGACTTGGAGCTCAGGAGGCAGACTGTATTCAAAAGCTGAACAAGTCAGATATCCTTCATGTTTCCAGAACTGTCCAGTTGTTTAATATTTTCAGTTTTGAGGGTCACTATTGTTTGGTGTTTGAGCTGTTGCGTCCCAGACCTCTCCATCAATACTTTCAGAAATGTCAGTTTGATAACGAGGAGGCAAAGTTAAAAGTGATCAGAAAAATAACTTTACAACTGTTACAAGCTCTTGGATTTCTTAAAAGAGAAAATGTTATCCATGCTGACTTGAAACCAGAGAACATTCTTTTTGAAGAAGGTGAAGAAATCAAGATCAAAGTTGTTGACTTTGGGAATGCAATACACTGGGTTCACAGAGAGGTTTCCTTGTATTATGATGAGTTTGAACTGCAAACGTTACTCTACAGAGCTCCAGAGGTGATGTTCGGTGTTCATTTTGGTCCCGAAGTTGACATGTGGTCTTTAGGATGTATTTTGGCTGAGCTGTACATTGGCAAACCTTTATTTCTTGGAAGAAATAAAATTGAAATAATGCAAGAGGTGACCTCAGTCTTTGGTCCCATACCCAGGAATCCATTCCAGACTGGCAAGTTCTTCCAAGATTTGTCAGAGTTTGTTGGTCACAATCCAGAAGTCAATCAGCTTGTCCTTGTGGCCAACCTGATGAAGAAACTTCACAATTCAAGGAATTATGCCTTTGCAAGTTTCTTGGTTGGTTTGCTGCGTTACAACCCAAGTAAACGACTTACACCCTCTCAAGCTGCTATGCATCCATTTTTAGCTCCTGATTTTCTGTATGCTTATTTGTTGCCACAGGAAGGAGATAAAATCTCAGATGCTGCTGCAGGTTACACAGATATATTAATCACTCCTGAGCAATATGTCTCCAAGCCACACGTTGACAAGGATATCAAAAGGCAACATTTTTCTGGAACTGAACTGCTTAAGACAGGGACGAGGACTGTGCTTTATAGCAGTAGTAAAGCTTCGTCTCCTGTGGTAACAAGCCAAACCGAGGAGAGTGACGTAAATAACTTTTCACAAGCAACAATTAAGAATTATGGAAAATCTCAATGGCCAAATGAAGTGATTGTAATGGATGAGAAATCTAACAACGCTGATCAGTTGCCAGTAGAAAATTCCAGATATGCAATGGAGGGCCCTCTCACATCAAGCAAGCCTACACCAACTCGCCCACAGAATAAAAGATCTCCTTTGAATAAAGAAAAGATAAACTCTGGTGATATAGTGAAGAAGGAAAGAGCAACCTCTATCAACAACAGGTCTGCTCTTCCAACTAACCCAAATCCTGTTTGTGGAAGTCAAAACAACAACAGTTTTTCAAAATTGGACAGCACAGAACGGTCCGATCTGGTGGAGATTTCACCAAGGAAAACTCGCCTTCCTAGCTCTTACAATGAGCTGGAGAGATCTTCAATGAAATTAAAAGACCGTCAAGCTGATACGTCCCAACCTAGTAGCACTGTTACGCCAGGCGCAAGTGCTGTAAACAATATAAAGAATCATCCTTTGTCAGAAAATGTTCTCGATCTTCCCTCGCGGTGGAATAGCAATGCTGTGAGTAAAAATAAAGCAGAGAGTGTTGACAGGTTTCATCATAAAGCGATTTCTACGAAAACAAGATTTGATTTAGACAAGTGTTCTTCCTTCGATGAGACAAATGTTGCAGCAAGGACACGTGTCTATAACAGGAAAACAAAATACAGAAAACTAGATCAACTAAACCATTTGTCTTTAAAAATAGAATGTAGTAAACTCGAGGACCCTGTTACCGGCCAAAGGAAAAAAATGGCAAAAAACTCTAGATCTCAGTCGGTGAAAACATCCCCAATGGATCAAAGTCGCAACTCGAGATGTAGAAGGAAAAAGCTAAGTCAGGAGCAACTGGAGCAGGACTCGGTAAAAGCTGCATCTCCTGGCAAATACCAAGATGATGTAGTGATGTTGCTCTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9V3D5	Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Drosophila melanogaster OX=7227 GN=Dyrk2 PE=1 SV=1
Q9NR20	Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Homo sapiens OX=9606 GN=DYRK4 PE=1 SV=2
P83102	Putative dual specificity tyrosine-phosphorylation-regulated kinase 3 homolog OS=Drosophila melanogaster OX=7227 GN=Dyrk3 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003450 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR050494 all species →	Family	Serine/threonine and dual-specificity kinase	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24058 all species →	DUAL SPECIFICITY PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0003713 all species →	Molecular Function	transcription coactivator activity	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0018105 all species →	Biological Process	peptidyl-serine phosphorylation	Interproscan
GO:0018107 all species →	Biological Process	peptidyl-threonine phosphorylation	Interproscan
GO:0045893 all species →	Biological Process	positive regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18669	DYRK2_3_4; dual specificity tyrosine-phosphorylation-regulated kinase 2/3/4	EC:2.7.12.1	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.