Genomic Location: Ap11:16853811...16856554
NR annotation: XP_020610325.1, uncharacterized protein LOC110048909 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap11.1525 |
| Transcript |
| evm.model.Ap11.1525 |
| Protein |
| evm.model.Ap11.1525 |
| UniProt accession | Description |
|---|---|
| Q9F234 | Alpha-glucosidase 2 OS=Bacillus thermoamyloliquefaciens OX=1425 PE=3 SV=1 |
| A1CNK4 | Probable alpha/beta-glucosidase agdC OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=agdC PE=3 SV=1 |
| Q0CMA7 | Probable alpha/beta-glucosidase agdC OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=agdC PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006772 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF21365 all species → | Glyco_hydro_31_3rd | Glycosyl hydrolase family 31 C-terminal domain | Domain | Interproscan |
| PF01055 all species → | Glyco_hydro_31_2nd | Glycosyl hydrolases family 31 TIM-barrel domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR017853 all species → | Homologous_superfamily | Glycoside hydrolase superfamily | Interproscan |
| IPR048395 all species → | Domain | Glycosyl hydrolase family 31, C-terminal domain | Interproscan |
| IPR000322 all species → | Domain | Glycoside hydrolase family 31, TIM barrel domain | Interproscan |
| IPR013780 all species → | Homologous_superfamily | Glycosyl hydrolase, all-beta | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22762 all species → | ALPHA-GLUCOSIDASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004553 all species → | Molecular Function | hydrolase activity, hydrolyzing O-glycosyl compounds | Interproscan |
| GO:0005975 all species → | Biological Process | carbohydrate metabolic process | Interproscan |
evm.model.Ap11.1525.Transcript abundance of evm.model.Ap11.1525 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
