Detailed information of evm.model.Ap11.1535.1.5f15de28 in Astrangia poculata

Genomic Location: Ap11:16999554...17033835
NR annotation: XP_020627607.1, 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4-like isoform X2 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q151471-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Homo sapiens OX=9606 GN=PLCB4 PE=1 SV=3
Q9QW071-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2
Q077221-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 (Fragment) OS=Bos taurus OX=9913 GN=PLCB4 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001154 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00388
all species →		PI-PLC-XPhosphatidylinositol-specific phospholipase C, X domainFamilyInterproscan
PF06631
all species →		DUF1154Protein of unknown function (DUF1154)FamilyInterproscan
PF00387
all species →		PI-PLC-YPhosphatidylinositol-specific phospholipase C, Y domainFamilyInterproscan
PF09279
all species →		EF-hand_likePhosphoinositide-specific phospholipase C, efhand-likeDomainInterproscan
PF17787
all species →		PH_14PH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000909
all species →		DomainPhosphatidylinositol-specific phospholipase C, X domainInterproscan
IPR042531
all species →		Homologous_superfamilyPhospholipase C-beta, C-terminal domain superfamilyInterproscan
IPR009535
all species →		Conserved_sitePhospholipase C-beta, conserved siteInterproscan
IPR001711
all species →		DomainPhospholipase C, phosphatidylinositol-specific, Y domainInterproscan
IPR000008
all species →		DomainC2 domainInterproscan
IPR001192
all species →		FamilyPhosphoinositide phospholipase C familyInterproscan
IPR015359
all species →		DomainPhosphoinositide-specific phospholipase C, EF-hand-like domainInterproscan
IPR037862
all species →		DomainPLC-beta, PH domainInterproscan
IPR035892
all species →		Homologous_superfamilyC2 domain superfamilyInterproscan
IPR017946
all species →		Homologous_superfamilyPLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamilyInterproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10336
all species →		PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004435
all species →		Molecular Functionphosphatidylinositol phospholipase C activityInterproscan
GO:0006629
all species →		Biological Processlipid metabolic processInterproscan
GO:0007165
all species →		Biological Processsignal transductionInterproscan
GO:0035556
all species →		Biological Processintracellular signal transductionInterproscan
GO:0008081
all species →		Molecular Functionphosphoric diester hydrolase activityInterproscan
GO:0048015
all species →		Biological Processphosphatidylinositol-mediated signalingInterproscan
GO:0051209
all species →		Biological Processrelease of sequestered calcium ion into cytosolInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K05858PLCB; phosphatidylinositol phospholipase C, betaEC:3.1.4.11
Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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