Gene detail

Detailed information of evm.model.Ap11.1536 in Astrangia poculata

Genomic Location: Ap11:17048426...17048839
NR annotation: CAH3019834.1, unnamed protein product [Porites evermanni]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O73755	Gremlin-1 OS=Gallus gallus OX=9031 GN=GREM1 PE=2 SV=1
O60565	Gremlin-1 OS=Homo sapiens OX=9606 GN=GREM1 PE=1 SV=1
Q8WNY1	Gremlin-1 OS=Macaca mulatta OX=9544 GN=GREM1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001038 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03045 all species →	DAN	DAN domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006207 all species →	Domain	Cystine knot, C-terminal	Interproscan
IPR029034 all species →	Homologous_superfamily	Cystine-knot cytokine	Interproscan
IPR004133 all species →	Domain	DAN	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15283 all species →	GREMLIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0009887 all species →	Biological Process	animal organ morphogenesis	Interproscan
GO:0036122 all species →	Molecular Function	BMP binding	Interproscan
GO:0038098 all species →	Biological Process	sequestering of BMP from receptor via BMP binding	Interproscan
GO:0048018 all species →	Molecular Function	receptor ligand activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23318	GREM; gremlin	-	TGF-beta signaling pathway	ko04350	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.