Gene detail

Detailed information of evm.model.Ap11.1583 in Astrangia poculata

Genomic Location: Ap11:17354212...17355138
NR annotation: XP_027054746.1, RWD domain-containing protein 2B-like [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q99M03	RWD domain-containing protein 2B OS=Mus musculus OX=10090 GN=Rwdd2b PE=2 SV=1
Q5R9U9	RWD domain-containing protein 2B OS=Pongo abelii OX=9601 GN=RWDD2B PE=2 SV=1
P57060	RWD domain-containing protein 2B OS=Homo sapiens OX=9606 GN=RWDD2B PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008975 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05773 all species →	RWD	RWD domain	Domain	Interproscan
PF06544 all species →	Prp3_C	Small nuclear ribonucleoprotein Prp3, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006575 all species →	Domain	RWD domain	Interproscan
IPR016135 all species →	Homologous_superfamily	Ubiquitin-conjugating enzyme/RWD-like	Interproscan
IPR017359 all species →	Family	Phomoidride biosynthesis cluster protein F-like	Interproscan
IPR010541 all species →	Domain	Small nuclear ribonucleoprotein Prp3, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15955 all species →	RWD DOMAIN CONTAINING PROTEIN 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap11.1583.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.