Detailed information of evm.model.Ap11.1606 in Astrangia poculata

Genomic Location: Ap11:17606233...17623802
NR annotation: XP_020626202.1, cysteine synthase 1-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7RYW6Cysteine synthase 1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=cys-17 PE=3 SV=1
P50867Cysteine synthase 1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=cysB PE=3 SV=2
O59701Cysteine synthase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cys11 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004384 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00291
all species →		PALPPyridoxal-phosphate dependent enzymeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036052
all species →		Homologous_superfamilyTryptophan synthase beta chain-like, PALP domain superfamilyInterproscan
IPR050214
all species →		FamilyCysteine Synthase/Cystathionine Beta-SynthaseInterproscan
IPR001926
all species →		DomainTryptophan synthase beta chain-like, PALP domainInterproscan
IPR001216
all species →		Binding_siteCysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10314
all species →		CYSTATHIONINE BETA-SYNTHASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0019344
all species →		Biological Processcysteine biosynthetic processInterproscan
GO:0006535
all species →		Biological Processcysteine biosynthetic process from serineInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01738cysK; cysteine synthaseEC:2.5.1.47
Cysteine and methionine metabolismko00270deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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