Gene detail

Detailed information of evm.model.Ap11.1629 in Astrangia poculata

Genomic Location: Ap11:17852857...17856586
NR annotation: XP_020626181.1, signal recognition particle 14 kDa protein-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A6QQL9	Signal recognition particle 14 kDa protein OS=Bos taurus OX=9913 GN=SRP14 PE=3 SV=1
P16254	Signal recognition particle 14 kDa protein OS=Mus musculus OX=10090 GN=Srp14 PE=1 SV=1
P16255	Signal recognition particle 14 kDa protein OS=Canis lupus familiaris OX=9615 GN=SRP14 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009252 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02290 all species →	SRP14	Signal recognition particle 14kD protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009018 all species →	Homologous_superfamily	Signal recognition particle, SRP9/SRP14 subunit	Interproscan
IPR003210 all species →	Family	Signal recognition particle, SRP14 subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12013 all species →	SIGNAL RECOGNITION PARTICLE 14 KD PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006614 all species →	Biological Process	SRP-dependent cotranslational protein targeting to membrane	Interproscan
GO:0008312 all species →	Molecular Function	7S RNA binding	Interproscan
GO:0048500 all species →	Cellular Component	signal recognition particle	Interproscan
GO:0005786 all species →	Cellular Component	signal recognition particle, endoplasmic reticulum targeting	Interproscan
GO:0030942 all species →	Molecular Function	endoplasmic reticulum signal peptide binding	Interproscan
GO:0045047 all species →	Biological Process	protein targeting to ER	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03104	SRP14; signal recognition particle subunit SRP14	-	Secretion system	ko02044	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.