Detailed information of evm.model.Ap11.1634 in Astrangia poculata

Genomic Location: Ap11:17868100...17905637
NR annotation: KAJ7373188.1, hypothetical protein OS493_014336 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8AV58Protein sidekick-1 OS=Gallus gallus OX=9031 GN=SDK1 PE=1 SV=1
P11369LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2
B3EWZ5MAM and LDL-receptor class A domain-containing protein 1 (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000055 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041
all species →
fn3Fibronectin type III domainDomainInterproscan
PF07885
all species →
Ion_trans_2Ion channelFamilyInterproscan
PF13385
all species →
Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00088
all species →
TrefoilTrefoil (P-type) domainDomainInterproscan
PF00629
all species →
MAMMAM domain, meprin/A5/muDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003961
all species →
DomainFibronectin type IIIInterproscan
IPR000998
all species →
DomainMAM domainInterproscan
IPR036116
all species →
Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR013783
all species →
Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR044913
all species →
Homologous_superfamilyP-type trefoil domain superfamilyInterproscan
IPR050379
all species →
FamilyType I Cytokine ReceptorInterproscan
IPR013099
all species →
DomainPotassium channel domainInterproscan
IPR017957
all species →
Conserved_siteP-type trefoil, conserved siteInterproscan
IPR000519
all species →
DomainP-type trefoil domainInterproscan
IPR017994
all species →
FamilyP-type trefoil, chordataInterproscan
IPR013320
all species →
Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23036
all species →
CYTOKINE RECEPTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0004896
all species →
Molecular Functioncytokine receptor activityInterproscan
GO:0009897
all species →
Cellular Componentexternal side of plasma membraneInterproscan
GO:0019221
all species →
Biological Processcytokine-mediated signaling pathwayInterproscan
GO:0019955
all species →
Molecular Functioncytokine bindingInterproscan
GO:0043235
all species →
Cellular Componentreceptor complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap11.1634.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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