Genomic Location: Ap11:19226299...19240426
NR annotation: XP_020632073.1, sec14 cytosolic factor-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap11.1752 |
| Transcript |
| evm.model.Ap11.1752 |
| Protein |
| evm.model.Ap11.1752 |
| UniProt accession | Description |
|---|---|
| Q92503 | SEC14-like protein 1 OS=Homo sapiens OX=9606 GN=SEC14L1 PE=1 SV=2 |
| A8Y5H7 | SEC14-like protein 1 OS=Mus musculus OX=10090 GN=Sec14l1 PE=1 SV=1 |
| Q0V9N0 | SEC14-like protein 5 OS=Xenopus tropicalis OX=8364 GN=sec14l1 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0008587 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03765 all species → | CRAL_TRIO_N | CRAL/TRIO, N-terminal domain | Domain | Interproscan |
| PF00650 all species → | CRAL_TRIO | CRAL/TRIO domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011074 all species → | Domain | CRAL/TRIO, N-terminal domain | Interproscan |
| IPR001251 all species → | Domain | CRAL-TRIO lipid binding domain | Interproscan |
| IPR036865 all species → | Homologous_superfamily | CRAL-TRIO lipid binding domain superfamily | Interproscan |
| IPR036273 all species → | Homologous_superfamily | CRAL/TRIO, N-terminal domain superfamily | Interproscan |
| IPR051026 all species → | Family | Phosphatidylinositol/phosphatidylcholine transfer | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45657 all species → | CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED | Interproscan |
evm.model.Ap11.1752 in Astrangia poculata.| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K26544 | SEC14, SEC14L; phosphatidylinositol/phosphatidylcholine transfer protein | - | Transporters | ko02000 | deepkoala |
Transcript abundance of evm.model.Ap11.1752 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
