Detailed information of evm.model.Ap11.1801 in Astrangia poculata

Genomic Location: Ap11:19915989...19943050
NR annotation: CAH3134445.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9U8W7Techylectin-5B OS=Tachypleus tridentatus OX=6853 PE=1 SV=1
Q5EA66Angiopoietin-related protein 7 OS=Bos taurus OX=9913 GN=ANGPTL7 PE=2 SV=1
O00602Ficolin-1 OS=Homo sapiens OX=9606 GN=FCN1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000013 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00147
all species →		Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF00812
all species →		EphrinEphrinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002181
all species →		DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR001799
all species →		DomainEphrin receptor-binding domainInterproscan
IPR008972
all species →		Homologous_superfamilyCupredoxinInterproscan
IPR036056
all species →		Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR050373
all species →		FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR014716
all species →		Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19143
all species →		FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan
GO:0062023
all species →		Cellular Componentcollagen-containing extracellular matrixInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap11.1801.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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