Gene detail

Detailed information of evm.model.Ap11.1842 in Astrangia poculata

Genomic Location: Ap11:20310695...20356178
NR annotation: XP_022798833.1, tensin-like isoform X3 [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap11.1842

atgtcgtttaccagaaatgaggagggggcctgccattggccactgcttatggagtcaatacctatacattttgccgagggaggatgccccagatctcctgacaggctcaggcattcggcactcatgttatcagaaattggtaactgttttttctggatccgcacatgcacctgggtcaaagtgcagtgtctgcagcagggttctgctaattcaactcacaataaatacaagactttacctgatgatgaaattgctagaagaaatcgagtgccatcatcagccaaaaaccttgtcacaaacatatgtcatcatgttaggcacagagtatcaagaaacagagtgcggcatgtcgatgagcagtttgatcttgacttgacatacattacagacagaataatagcaatgtcatttcctggatcggggctggaaacaacttacagaaataacttgagagaagtggcaaaaatgctccagacaaatcatcaagataagtacatggtttttaatttatctgaaagaagatatgacatatccaaactaaatcatcaggttttagattttggttggccagaccacttagcaccaccactagagagactatgtagcataattaaatcaattgattcctggctcaagtctgaccctaaccatgtagtagttgtccattgcaagggtggtaaaggaaggactggtgttgtcattgcagcatacatgcattttagcaagatatgctccagtcctcaagctgcccttgactggtttgctatgaaaagattctatgatgatagcttaggaggagtcacacaaccatcacagagaagatatgtccattattttagtgattacctagatggaaaggttaaacttaatacagaccctatgtttcttcatcatattattattcatggaattcctagtttcgataacagagacggttgcaagccattcttgcgggtatatgatgggctgaaactcatttacacatcaggggttttccatgtaacaccagatatggagagagtttgtatcaccattgaaggaggactcatacttcatggagacgtcttgatcaagtgttaccacaagaacacgctgtcttctggccgtgatattatttttagatgtcagttccacacaggtgcaattagagatcatggcttagtattggacaagacggaactggatgacgcttgtaaagataggaggtttcctgatggatgtaaagtggagttcgtgttttccgcaactggaaactttgtatctgaaatcaaaaataacgagagactacgctcgataatacggcactcgctacaacctgtggagaatccagatactgttctgtacccgctggataactggtatgagggcagtggagaaagtgcaagctcaccgccacctgatgggagcagtactagagaagattacaagaaggcagattacacgagccaagaaagcacggcaaagggaagtagtgacagtctgaagcgccctcccccagagtacgtggctggtccagtgaatggacacctgtacgctcaagtggacaaagcattcaagaagaaagtacggtctatgagccttgatagcggtgctcgatctagaggcggagaacatctaaacttctttgaaaaccgagcaaacactttgactcgaagaaatgcgtatggatttagaaacaacgagagtgcagattgcaggttaaacaaacccagtctgcagtacaccaacggcacaatgcagcagtcaagtggagacgggatgaatagtgaagtaaaatcgatcgaaaagcttttaaaagagcttggggattgctcagagctcttggatacaaccctgcagcaagcacgtcccggcacaaggggcacggagtcccaaaatgtccgggtcttaaacggcggaataatatctccaaacacaactgtgaccccacctgggcctcctgtgcgtcagaaggcgagttttgatgcgggggtgcggtataacagaaagggtttaccaggggaactttcctttgaaaatgggatcagtgctataagatctggccaaggtacatcgactcggagtgccacaacactccctccatattcacaaagcggctcgtggaatggcaatcacagaacggggcagatgtccaatggtatctctgtaggtgagacacctttgtttgttttacatgaagcgcctttgtcacaaacatcaccgccagtgtctccattgtcgccgaaattttatgccacgcaaatgatgcccagaacttttaaagctacaacggtcacccacacgacagtgggttacaacgctggtccacatgtcgggacgaatggaatgtttgacgaatgggccactgctgattctggtaagcaaaaacgagggcctgtcgtccttgatttcaataacaataacaataaatctgcaaacagtgtggatctgtttgatttggacgggcgtaaaaccattgaagattcggagacgcttccggagaaaggcaatgtccgctcgaaaatagtgcttctcaacgacatgtttcagccggacaagatgcgtccgctgcctcaccaccatattaaaggccagttggttcctatgccgggtcttacaggcgtgtcaccgacggaaatgtgtaaggagatatcaaattacaacgcacagtctttagccccaggagaactgagtcactctacaggaactttgtacaccagtggggccccacccaagaagattgttgagcggacaattcacgtggccgagccgccgcacaaggaaatcgattttatgggatttcagcgatcacgtgtagctcccgctcatgagtatcttgttcacaagacagacttcaacgagcaccactcccctcccagcagcattgacgggatcagtctggatgaaggagtggagtctaaagggtccattgatgaacacaccaaccttggcacatcaccatcggccagcagtgatggtcacacggactcagcatttggcgggtccatcgtcagctcgtcatcagtctccactcctgtagctggtcactcgtcaaaccggtttaacccgacgttaagcacgacagcgagccatgaccaggaggcagggaatgagttggtgagccagcaatcaagttccagcaatcttctggaaagtactccagtggatgtacaagaggctcgggaagatgaggaggcgggttacgcaaggctggaggacatccgggctgccaaagagtccaggcaaaacgctagtcccgaaactggcgtttctactgagactcacaccaccctggaagggacaagcccattacacaccccaagggtggagggcaccgtggagcagatccaggctcaaaattcctctgatgatgtcgaagctataaaggacatactatcggagatgactgatatgagtgtaagcgttccacagccaacgcaacttagtcgttccagtactccgcagagcttcaggagcgggggactggagaacaggggcagaagtcctgtattgtcggatggatctgggtcatttgaaaatgcgatacagagaaagaaatctcatcctcactcagataaaggatacgggtcaacaactagcgtatcgtctggctcgtcgggcgacaatgtttttcttccggacagtccaaagattccaggactgaaattcgaccgtgacacgtcgtcattttggtataaacccaccattacaagaaatgatgccaacgatattctaaaagactcggagccaggctcctttatcatccgggatagtcaatccttcccaggagcctttggtttagctgtgaaggtagcagtgccacctgcgcatgtgctgcagggacttcaaggggacctaactaaagttgatctcgacaatgaacttgtgcggcactttctcatcgagacgacgaagaagggcgtccgattgaaaggctacaacgacgaacccatatttgggagcttggctgcattcgtttatcaacactccataacgcctttggcattacccatcagactgactatgccttctcgcgaccatttagcaggagataaggaccagtctactgataaagaagacggacaatcctggcctaagggcgcagttggtacgctaatgtatctaggcaacagtgaggtggaaatgctaactggaccaagcgccatacaacgcactgtggaacgtctgtccacagaggaggctgctaagaaattcaccacggtcagcttcaaggtcacaccagagggaatgactgttactgataacgaacgaaaagtattctttaggcagcattttcacatgaagtcgatactgtattgcggaatagatcccagcgataaaagatgggaattaaagacgcctacatacagtggcaagtcaaagtcatttggtattgtgttacggaaaactggtggagttcacaatgagtgtcatttattcggagaaatctccaaagactggcctgcaagtattcttgtcaatatactcaatagatccatgacgtcatccacgtaa

Transcript

evm.model.Ap11.1842

ATGTCGTTTACCAGAAATGAGGAGGGGGCCTGCCATTGGCCACTGCTTATGGAGTCAATACCTATACATTTTGCCGAGGGAGGATGCCCCAGATCTCCTGACAGGCTCAGGCATTCGGCACTCATGTTATCAGAAATTGGTAACTGTTTTTTCTGGATCCGCACATGCACCTGGGTCAAAGTGCAGTGTCTGCAGCAGGGTTCTGCTAATTCAACTCACAATAAATACAAGACTTTACCTGATGATGAAATTGCTAGAAGAAATCGAGTGCCATCATCAGCCAAAAACCTTGTCACAAACATATGTCATCATGTTAGGCACAGAGTATCAAGAAACAGAGTGCGGCATGTCGATGAGCAGTTTGATCTTGACTTGACATACATTACAGACAGAATAATAGCAATGTCATTTCCTGGATCGGGGCTGGAAACAACTTACAGAAATAACTTGAGAGAAGTGGCAAAAATGCTCCAGACAAATCATCAAGATAAGTACATGGTTTTTAATTTATCTGAAAGAAGATATGACATATCCAAACTAAATCATCAGGTTTTAGATTTTGGTTGGCCAGACCACTTAGCACCACCACTAGAGAGACTATGTAGCATAATTAAATCAATTGATTCCTGGCTCAAGTCTGACCCTAACCATGTAGTAGTTGTCCATTGCAAGGGTGGTAAAGGAAGGACTGGTGTTGTCATTGCAGCATACATGCATTTTAGCAAGATATGCTCCAGTCCTCAAGCTGCCCTTGACTGGTTTGCTATGAAAAGATTCTATGATGATAGCTTAGGAGGAGTCACACAACCATCACAGAGAAGATATGTCCATTATTTTAGTGATTACCTAGATGGAAAGGTTAAACTTAATACAGACCCTATGTTTCTTCATCATATTATTATTCATGGAATTCCTAGTTTCGATAACAGAGACGGTTGCAAGCCATTCTTGCGGGTATATGATGGGCTGAAACTCATTTACACATCAGGGGTTTTCCATGTAACACCAGATATGGAGAGAGTTTGTATCACCATTGAAGGAGGACTCATACTTCATGGAGACGTCTTGATCAAGTGTTACCACAAGAACACGCTGTCTTCTGGCCGTGATATTATTTTTAGATGTCAGTTCCACACAGGTGCAATTAGAGATCATGGCTTAGTATTGGACAAGACGGAACTGGATGACGCTTGTAAAGATAGGAGGTTTCCTGATGGATGTAAAGTGGAGTTCGTGTTTTCCGCAACTGGAAACTTTGTATCTGAAATCAAAAATAACGAGAGACTACGCTCGATAATACGGCACTCGCTACAACCTGTGGAGAATCCAGATACTGTTCTGTACCCGCTGGATAACTGGTATGAGGGCAGTGGAGAAAGTGCAAGCTCACCGCCACCTGATGGGAGCAGTACTAGAGAAGATTACAAGAAGGCAGATTACACGAGCCAAGAAAGCACGGCAAAGGGAAGTAGTGACAGTCTGAAGCGCCCTCCCCCAGAGTACGTGGCTGGTCCAGTGAATGGACACCTGTACGCTCAAGTGGACAAAGCATTCAAGAAGAAAGTACGGTCTATGAGCCTTGATAGCGGTGCTCGATCTAGAGGCGGAGAACATCTAAACTTCTTTGAAAACCGAGCAAACACTTTGACTCGAAGAAATGCGTATGGATTTAGAAACAACGAGAGTGCAGATTGCAGGTTAAACAAACCCAGTCTGCAGTACACCAACGGCACAATGCAGCAGTCAAGTGGAGACGGGATGAATAGTGAAGTAAAATCGATCGAAAAGCTTTTAAAAGAGCTTGGGGATTGCTCAGAGCTCTTGGATACAACCCTGCAGCAAGCACGTCCCGGCACAAGGGGCACGGAGTCCCAAAATGTCCGGGTCTTAAACGGCGGAATAATATCTCCAAACACAACTGTGACCCCACCTGGGCCTCCTGTGCGTCAGAAGGCGAGTTTTGATGCGGGGGTGCGGTATAACAGAAAGGGTTTACCAGGGGAACTTTCCTTTGAAAATGGGATCAGTGCTATAAGATCTGGCCAAGGTACATCGACTCGGAGTGCCACAACACTCCCTCCATATTCACAAAGCGGCTCGTGGAATGGCAATCACAGAACGGGGCAGATGTCCAATGGTATCTCTGTAGGTGAGACACCTTTGTTTGTTTTACATGAAGCGCCTTTGTCACAAACATCACCGCCAGTGTCTCCATTGTCGCCGAAATTTTATGCCACGCAAATGATGCCCAGAACTTTTAAAGCTACAACGGTCACCCACACGACAGTGGGTTACAACGCTGGTCCACATGTCGGGACGAATGGAATGTTTGACGAATGGGCCACTGCTGATTCTGGTAAGCAAAAACGAGGGCCTGTCGTCCTTGATTTCAATAACAATAACAATAAATCTGCAAACAGTGTGGATCTGTTTGATTTGGACGGGCGTAAAACCATTGAAGATTCGGAGACGCTTCCGGAGAAAGGCAATGTCCGCTCGAAAATAGTGCTTCTCAACGACATGTTTCAGCCGGACAAGATGCGTCCGCTGCCTCACCACCATATTAAAGGCCAGTTGGTTCCTATGCCGGGTCTTACAGGCGTGTCACCGACGGAAATGTGTAAGGAGATATCAAATTACAACGCACAGTCTTTAGCCCCAGGAGAACTGAGTCACTCTACAGGAACTTTGTACACCAGTGGGGCCCCACCCAAGAAGATTGTTGAGCGGACAATTCACGTGGCCGAGCCGCCGCACAAGGAAATCGATTTTATGGGATTTCAGCGATCACGTGTAGCTCCCGCTCATGAGTATCTTGTTCACAAGACAGACTTCAACGAGCACCACTCCCCTCCCAGCAGCATTGACGGGATCAGTCTGGATGAAGGAGTGGAGTCTAAAGGGTCCATTGATGAACACACCAACCTTGGCACATCACCATCGGCCAGCAGTGATGGTCACACGGACTCAGCATTTGGCGGGTCCATCGTCAGCTCGTCATCAGTCTCCACTCCTGTAGCTGGTCACTCGTCAAACCGGTTTAACCCGACGTTAAGCACGACAGCGAGCCATGACCAGGAGGCAGGGAATGAGTTGGTGAGCCAGCAATCAAGTTCCAGCAATCTTCTGGAAAGTACTCCAGTGGATGTACAAGAGGCTCGGGAAGATGAGGAGGCGGGTTACGCAAGGCTGGAGGACATCCGGGCTGCCAAAGAGTCCAGGCAAAACGCTAGTCCCGAAACTGGCGTTTCTACTGAGACTCACACCACCCTGGAAGGGACAAGCCCATTACACACCCCAAGGGTGGAGGGCACCGTGGAGCAGATCCAGGCTCAAAATTCCTCTGATGATGTCGAAGCTATAAAGGACATACTATCGGAGATGACTGATATGAGTGTAAGCGTTCCACAGCCAACGCAACTTAGTCGTTCCAGTACTCCGCAGAGCTTCAGGAGCGGGGGACTGGAGAACAGGGGCAGAAGTCCTGTATTGTCGGATGGATCTGGGTCATTTGAAAATGCGATACAGAGAAAGAAATCTCATCCTCACTCAGATAAAGGATACGGGTCAACAACTAGCGTATCGTCTGGCTCGTCGGGCGACAATGTTTTTCTTCCGGACAGTCCAAAGATTCCAGGACTGAAATTCGACCGTGACACGTCGTCATTTTGGTATAAACCCACCATTACAAGAAATGATGCCAACGATATTCTAAAAGACTCGGAGCCAGGCTCCTTTATCATCCGGGATAGTCAATCCTTCCCAGGAGCCTTTGGTTTAGCTGTGAAGGTAGCAGTGCCACCTGCGCATGTGCTGCAGGGACTTCAAGGGGACCTAACTAAAGTTGATCTCGACAATGAACTTGTGCGGCACTTTCTCATCGAGACGACGAAGAAGGGCGTCCGATTGAAAGGCTACAACGACGAACCCATATTTGGGAGCTTGGCTGCATTCGTTTATCAACACTCCATAACGCCTTTGGCATTACCCATCAGACTGACTATGCCTTCTCGCGACCATTTAGCAGGAGATAAGGACCAGTCTACTGATAAAGAAGACGGACAATCCTGGCCTAAGGGCGCAGTTGGTACGCTAATGTATCTAGGCAACAGTGAGGTGGAAATGCTAACTGGACCAAGCGCCATACAACGCACTGTGGAACGTCTGTCCACAGAGGAGGCTGCTAAGAAATTCACCACGGTCAGCTTCAAGGTCACACCAGAGGGAATGACTGTTACTGATAACGAACGAAAAGTATTCTTTAGGCAGCATTTTCACATGAAGTCGATACTGTATTGCGGAATAGATCCCAGCGATAAAAGATGGGAATTAAAGACGCCTACATACAGTGGCAAGTCAAAGTCATTTGGTATTGTGTTACGGAAAACTGGTGGAGTTCACAATGAGTGTCATTTATTCGGAGAAATCTCCAAAGACTGGCCTGCAAGTATTCTTGTCAATATACTCAATAGATCCATGACGTCATCCACGTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5SSZ5	Tensin-3 OS=Mus musculus OX=10090 GN=Tns3 PE=1 SV=1
Q68CZ2	Tensin-3 OS=Homo sapiens OX=9606 GN=TNS3 PE=1 SV=2
Q04205	Tensin-1 OS=Gallus gallus OX=9031 GN=TNS1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001585 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00017 all species →	SH2	SH2 domain	Domain	Interproscan
PF08416 all species →	PTB	Phosphotyrosine-binding domain	Domain	Interproscan
PF00102 all species →	Y_phosphatase	Protein-tyrosine phosphatase	Domain	Interproscan
PF10409 all species →	PTEN_C2	C2 domain of PTEN tumour-suppressor protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000387 all species →	Domain	Tyrosine-specific protein phosphatases domain	Interproscan
IPR014020 all species →	Domain	Tensin phosphatase, C2 domain	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR029023 all species →	Domain	Tensin-type phosphatase domain	Interproscan
IPR036860 all species →	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR000242 all species →	Domain	Tyrosine-specific protein phosphatase, PTPase domain	Interproscan
IPR000980 all species →	Domain	SH2 domain	Interproscan
IPR013625 all species →	Domain	Tensin/EPS8 phosphotyrosine-binding domain	Interproscan
IPR051484 all species →	Family	Tensin Phosphatase	Interproscan
IPR029021 all species →	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR003595 all species →	Domain	Protein-tyrosine phosphatase, catalytic	Interproscan
IPR006020 all species →	Domain	PTB/PI domain	Interproscan
IPR033929 all species →	Domain	Tensin, phosphotyrosine-binding domain	Interproscan
IPR016130 all species →	Active_site	Protein-tyrosine phosphatase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45734 all species →	TENSIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016311 all species →	Biological Process	dephosphorylation	Interproscan
GO:0004725 all species →	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0006470 all species →	Biological Process	protein dephosphorylation	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005925 all species →	Cellular Component	focal adhesion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18080	TNS; tensin	-	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.