Gene detail

Detailed information of evm.model.Ap11.1844 in Astrangia poculata

Genomic Location: Ap11:20362871...20371215
NR annotation: XP_020623206.1, threonine synthase-like 2 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5RFE6	Threonine synthase-like 2 OS=Pongo abelii OX=9601 GN=THNSL2 PE=2 SV=1
Q86YJ6	Threonine synthase-like 2 OS=Homo sapiens OX=9606 GN=THNSL2 PE=1 SV=3
Q80W22	Threonine synthase-like 2 OS=Mus musculus OX=10090 GN=Thnsl2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004867 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00291 all species →	PALP	Pyridoxal-phosphate dependent enzyme	Family	Interproscan
PF14821 all species →	Thr_synth_N	Threonine synthase N terminus	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004450 all species →	Family	Threonine synthase-like	Interproscan
IPR001926 all species →	Domain	Tryptophan synthase beta chain-like, PALP domain	Interproscan
IPR037158 all species →	Homologous_superfamily	Threonine synthase, N-terminal domain superfamily	Interproscan
IPR051166 all species →	Family	Threonine Synthase	Interproscan
IPR036052 all species →	Homologous_superfamily	Tryptophan synthase beta chain-like, PALP domain superfamily	Interproscan
IPR029144 all species →	Domain	Threonine synthase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42690 all species →	THREONINE SYNTHASE FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0009071 all species →	Biological Process	serine family amino acid catabolic process	Interproscan
GO:0016311 all species →	Biological Process	dephosphorylation	Interproscan
GO:0030170 all species →	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0046360 all species →	Biological Process	2-oxobutyrate biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06037	THNSL2; O-phospho-L-threonine phospho-lyase	EC:4.2.3.-	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.