Detailed information of evm.model.Ap11.205.1.5f15dbbf in Astrangia poculata

Genomic Location: Ap11:2445936...2483334
NR annotation: XP_020600711.1, triple functional domain protein-like isoform X3 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P97924Kalirin OS=Rattus norvegicus OX=10116 GN=Kalrn PE=1 SV=3
A2CG49Kalirin OS=Mus musculus OX=10090 GN=Kalrn PE=1 SV=1
O60229Kalirin OS=Homo sapiens OX=9606 GN=KALRN PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000858 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07653
all species →
SH3_2Variant SH3 domainDomainInterproscan
PF07679
all species →
I-setImmunoglobulin I-set domainDomainInterproscan
PF00041
all species →
fn3Fibronectin type III domainDomainInterproscan
PF00435
all species →
SpectrinSpectrin repeatDomainInterproscan
PF00621
all species →
RhoGEFRhoGEF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018159
all species →
RepeatSpectrin/alpha-actininInterproscan
IPR036028
all species →
Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR000219
all species →
DomainDbl homology (DH) domainInterproscan
IPR011993
all species →
Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR001452
all species →
DomainSH3 domainInterproscan
IPR007110
all species →
DomainImmunoglobulin-like domainInterproscan
IPR051336
all species →
FamilyRho GTPase-activating Guanine Nucleotide Exchange FactorsInterproscan
IPR036116
all species →
Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR036179
all species →
Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013098
all species →
DomainImmunoglobulin I-setInterproscan
IPR035899
all species →
Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR013783
all species →
Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR001849
all species →
DomainPleckstrin homology domainInterproscan
IPR003961
all species →
DomainFibronectin type IIIInterproscan
IPR002017
all species →
RepeatSpectrin repeatInterproscan
IPR047054
all species →
DomainKalirin/Triple functional domain protein, pleckstrin homology (PH) domain 1Interproscan
IPR003599
all species →
DomainImmunoglobulin subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22826
all species →
RHO GUANINE EXCHANGE FACTOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005085
all species →
Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap11.205.1.5f15dbbf.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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