Detailed information of evm.model.Ap11.223 in Astrangia poculata

Genomic Location: Ap11:2809876...2813996
NR annotation: KAJ7380488.1, Alpha-catulin [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
G8JYB2Alpha-catulin OS=Caenorhabditis elegans OX=6239 GN=ctn-1 PE=1 SV=1
Q9UBT7Alpha-catulin OS=Homo sapiens OX=9606 GN=CTNNAL1 PE=1 SV=2
Q5RC06Alpha-catulin OS=Pongo abelii OX=9601 GN=CTNNAL1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002760 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01044
all species →		VinculinVinculin familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR030045
all species →		FamilyAlpha-catulin 1Interproscan
IPR036723
all species →		Homologous_superfamilyAlpha-catenin/vinculin-like superfamilyInterproscan
IPR006077
all species →		FamilyVinculin/alpha-cateninInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46342
all species →		ALPHA-CATULINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007266
all species →		Biological ProcessRho protein signal transductionInterproscan
GO:0007155
all species →		Biological Processcell adhesionInterproscan
GO:0051015
all species →		Molecular Functionactin filament bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap11.223.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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