Detailed information of evm.model.Ap11.234 in Astrangia poculata

Genomic Location: Ap11:2937228...2949121
NR annotation: XP_020630385.1, methenyltetrahydrofolate synthase domain-containing protein-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2KI24Methenyltetrahydrofolate synthase domain-containing protein OS=Bos taurus OX=9913 GN=MTHFSD PE=2 SV=1
Q3URQ7Methenyltetrahydrofolate synthase domain-containing protein OS=Mus musculus OX=10090 GN=Mthfsd PE=2 SV=1
Q52L34Methenyltetrahydrofolate synthase domain-containing protein OS=Xenopus laevis OX=8355 GN=mthfsd PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010148 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01812
all species →		5-FTHF_cyc-lig5-formyltetrahydrofolate cyclo-ligase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024185
all species →		Homologous_superfamily5-formyltetrahydrofolate cyclo-ligase-like domain superfamilyInterproscan
IPR002698
all species →		Family5-formyltetrahydrofolate cyclo-ligaseInterproscan
IPR037171
all species →		Homologous_superfamilyNagB/RpiA transferase-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13017
all species →		5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01934MTHFS; 5-formyltetrahydrofolate cyclo-ligaseEC:6.3.3.2
One carbon pool by folateko00670deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP