Detailed information of evm.model.Ap11.642 in Astrangia poculata

Genomic Location: Ap11:7124749...7136749
NR annotation: XP_020614949.1, uncharacterized protein LOC110053100 isoform X1 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8SSS9Probable serine/threonine-protein kinase qkgA OS=Dictyostelium discoideum OX=44689 GN=qkgA-1 PE=3 SV=2
Q5S006Leucine-rich repeat serine/threonine-protein kinase 2 OS=Mus musculus OX=10090 GN=Lrrk2 PE=1 SV=2
Q5S007Leucine-rich repeat serine/threonine-protein kinase 2 OS=Homo sapiens OX=9606 GN=LRRK2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000151 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00013
all species →		KH_1KH domainDomainInterproscan
PF16095
all species →		CORC-terminal of Roc, COR, domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011029
all species →		Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR036612
all species →		Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR004087
all species →		DomainK Homology domainInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR004088
all species →		DomainK Homology domain, type 1Interproscan
IPR036388
all species →		Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR032171
all species →		DomainC-terminal of Roc (COR) domainInterproscan
IPR000488
all species →		DomainDeath domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47679
all species →		PROTEIN TORNADO 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0007165
all species →		Biological Processsignal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap11.642.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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