Detailed information of evm.model.Ap11.675 in Astrangia poculata

Genomic Location: Ap11:7553692...7555275
NR annotation: XP_020603743.1, E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
M9PH32Protein meiotic P26 OS=Drosophila melanogaster OX=7227 GN=mei-P26 PE=1 SV=1
Q8MQJ9Protein brain tumor OS=Drosophila melanogaster OX=7227 GN=brat PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000277 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17170
all species →
DUF51286-bladed beta-propellerRepeatInterproscan
PF00630
all species →
FilaminFilamin/ABP280 repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011042
all species →
Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR001258
all species →
RepeatNHL repeatInterproscan
IPR017868
all species →
RepeatFilamin/ABP280 repeat-likeInterproscan
IPR013783
all species →
Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR001298
all species →
RepeatFilamin/ABP280 repeatInterproscan
IPR014756
all species →
Homologous_superfamilyImmunoglobulin E-setInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10680
all species →
PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005576
all species →
Cellular Componentextracellular regionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap11.675.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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